WormBase Tree Display for Gene: WBGene00007578
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WBGene00007578 | SMap | S_parent | Sequence | C14B1 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 4 | ||||||||
Name | Sequence_name | C14B1.7 | ||||||||
Molecular_name | C14B1.7 | |||||||||
Other_name | CELE_C14B1.7 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | C14B1.7 | |||||||||
DB_info | Database | AceView | gene | 3E810 | ||||||
WormQTL | gene | WBGene00007578 | ||||||||
WormFlux | gene | WBGene00007578 | ||||||||
NDB | locus_tag | CELE_C14B1.7 | ||||||||
NCBI | gene | 175478 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
2 | 21 Jun 2005 16:00:20 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
3 | 24 Aug 2009 11:40:56 | WBPerson1983 | Event | Changed_class | Pseudogene | CDS | ||||
4 | 19 Apr 2016 10:52:13 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Allele (76) | ||||||||||
In_cluster | conserved_RDE-1_cluster | |||||||||
conserved_miRNA_siRNA_cluster | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Contained_in_operon | CEOP3140 | |||||||||
Ortholog | WBGene00131466 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
Inparanoid_8 | ||||||||||
WBGene00194256 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00164224 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00139898 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00056767 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00067796 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00064525 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00024628 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | |||||||
WBGene00100316 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||||||
Paralog | WBGene00019862 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
WBGene00007624 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||||
WBGene00021711 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00020707 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
Structured_description | Automated_description | Enriched in germ line and head mesodermal cell based on RNA-seq studies. Is affected by several genes including hsf-1; eat-2; and elt-2 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including rotenone; manganese chloride; and bisphenol S based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | C14B1.7:wp61 | ||||||||
C14B1.7:wp98 | ||||||||||
C14B1.7:wp145 | ||||||||||
Corresponding_transcript_history | C14B1.7b:wp253 | |||||||||
Corresponding_pseudogene | C14B1.7 | |||||||||
Corresponding_pseudogene_history | C14B1.7:wp207 | |||||||||
Other_sequence (3) | ||||||||||
Associated_feature | WBsf991882 | |||||||||
Experimental_info | Expr_pattern | Expr1033261 | ||||||||
Expr1144563 | ||||||||||
Microarray_results (18) | ||||||||||
Expression_cluster (138) | ||||||||||
Map_info | Positive | Positive_clone | C14B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Interpolated_map_position | III | -4.33721 | ||||||||
Reference | WBPaper00003335 | |||||||||
WBPaper00004772 | ||||||||||
WBPaper00028800 | ||||||||||
WBPaper00029257 | ||||||||||
WBPaper00043989 | ||||||||||
Method | Gene |