WormBase Tree Display for Gene: WBGene00007564
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WBGene00007564 | SMap | S_parent | Sequence | C14A4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | mrps | ||||||
Allele (25) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00100406 | ||||||
00100407 | |||||||
00100408 | |||||||
Contained_in_operon | CEOP2496 | ||||||
Ortholog (38) | |||||||
Structured_description | Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 5 and ovarian dysgenesis 7. Is an ortholog of human MRPS22 (mitochondrial ribosomal protein S22). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080499 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14508) | ||
DOID:0111473 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14508) | ||||
Molecular_info | Corresponding_CDS | C14A4.14 | |||||
Corresponding_transcript | C14A4.14.1 | ||||||
Other_sequence (65) | |||||||
Associated_feature | WBsf658147 | ||||||
WBsf222031 | |||||||
WBsf222032 | |||||||
Experimental_info | RNAi_result | WBRNAi00008388 | Inferred_automatically | RNAi_primary | |||
WBRNAi00040470 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095493 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00024549 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00071212 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012848 | ||||||
Expr1033256 | |||||||
Expr1144535 | |||||||
Expr2013744 | |||||||
Expr2031979 | |||||||
Drives_construct | WBCnstr00033641 | ||||||
Construct_product | WBCnstr00033641 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (114) | |||||||
Interaction | WBInteraction000206274 | ||||||
WBInteraction000566919 | |||||||
WBInteraction000568207 | |||||||
WBInteraction000570172 | |||||||
Map_info | Map | II | Position | 3.11881 | Error | 0.000245 | |
Positive | Positive_clone | C14A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00041771 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |