WormBase Tree Display for Gene: WBGene00007552
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| WBGene00007552 | SMap | S_parent | Sequence | C13C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dyf-4 | Person_evidence | WBPerson252 | |||||
| Sequence_name | C13C12.2 | ||||||||
| Molecular_name | C13C12.2 | ||||||||
| C13C12.2.1 | |||||||||
| CE41198 | |||||||||
| C13C12.2.2 | |||||||||
| C13C12.2.3 | |||||||||
| Other_name | CELE_C13C12.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | dyf-4 | ||||||||
| DB_info | Database | AceView | gene | 5N4 | |||||
| WormQTL | gene | WBGene00007552 | |||||||
| WormFlux | gene | WBGene00007552 | |||||||
| NDB | locus_tag | CELE_C13C12.2 | |||||||
| NCBI | gene | 182568 | |||||||
| RefSeq | protein | NM_073738.7 | |||||||
| SwissProt | UniProtAcc | Q17944 | |||||||
| TREEFAM | TREEFAM_ID | TF315379 | |||||||
| UniProt_GCRP | UniProtAcc | Q17944 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Jun 2021 15:07:55 | WBPerson1983 | Event | Acquires_merge | WBGene00001120 | ||||
| Acquires_merge | WBGene00001120 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dyf | ||||||||
| Allele | WBVar00088603 | Inferred_automatically | From strain object: OE3001 | ||||||
| From strain object: SP1237 | |||||||||
| WBVar00088611 | |||||||||
| WBVar00089128 | |||||||||
| WBVar01499547 | |||||||||
| WBVar00009230 | |||||||||
| WBVar00009235 | |||||||||
| WBVar00009240 | |||||||||
| WBVar00009245 | |||||||||
| WBVar02151103 | |||||||||
| WBVar01499013 | |||||||||
| WBVar01055538 | |||||||||
| WBVar01055539 | |||||||||
| WBVar01868097 | |||||||||
| WBVar01055540 | |||||||||
| WBVar01055541 | |||||||||
| WBVar01868098 | |||||||||
| WBVar01055542 | |||||||||
| WBVar01868099 | |||||||||
| WBVar01055543 | |||||||||
| WBVar01055544 | |||||||||
| WBVar01055545 | |||||||||
| WBVar01055546 | |||||||||
| WBVar01055547 | |||||||||
| WBVar01055548 | |||||||||
| WBVar01055549 | |||||||||
| WBVar01055550 | |||||||||
| WBVar01055551 | |||||||||
| WBVar01055552 | |||||||||
| WBVar01055553 | |||||||||
| WBVar01055554 | |||||||||
| WBVar01055555 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar00472983 | |||||||||
| WBVar00472984 | |||||||||
| WBVar00472985 | |||||||||
| WBVar00472986 | |||||||||
| WBVar00472987 | |||||||||
| WBVar01499316 | |||||||||
| WBVar00472988 | |||||||||
| WBVar00472989 | |||||||||
| Legacy_information | [Herman RK] Defective in dye (FITC or DiO) filling of amphid and phasmid neurons. Chemotaxis defective. ME4(m158), ME4(m177), ME3(mn332) | ||||||||
| [C.elegansII] m158 : defective in dye (FITC or DiO) filling of amphid and phasmid neurons. Chemotaxis defective. ME4(m158), ME4(m177), ME3(mn332). OA2: m177, mn332mut. [Starich et al. 1995] | |||||||||
| Complementation_data | [Herman RK] dyf-4(m158) complements che-12(e1812) with respect to dye filling. All three dyf-4 alleles complement osm-6(p811) and che-11(e1810) | ||||||||
| Strain | WBStrain00029247 | ||||||||
| WBStrain00034358 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00059726 | ||||||||
| 00059727 | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C13C12.2 | |||||||
| Corresponding_CDS_history | C13C12.2:wp156 | ||||||||
| C13C12.2:wp177 | |||||||||
| Corresponding_transcript | C13C12.2.1 | ||||||||
| C13C12.2.2 | |||||||||
| C13C12.2.3 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf653229 | ||||||||
| WBsf1001605 | |||||||||
| WBsf1001606 | |||||||||
| WBsf1020589 | |||||||||
| WBsf020929 | |||||||||
| WBsf234693 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010679 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040429 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028839 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027634 | ||||||||
| Expr1033248 | |||||||||
| Expr1144494 | |||||||||
| Expr2000741 | |||||||||
| Expr2018960 | |||||||||
| Drives_construct | WBCnstr00033652 | ||||||||
| Construct_product | WBCnstr00033652 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (213) | |||||||||
| Interaction (168) | |||||||||
| Map_info | Map | V | Position | 4.47145 | |||||
| Positive | Positive_clone | C13C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 3073 | |||||||
| 3074 | |||||||||
| 3075 | |||||||||
| 3076 | |||||||||
| 3077 | |||||||||
| Pos_neg_data | 8321 | ||||||||
| Reference (13) | |||||||||
| Remark | [220202 skd] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (4.25381) | ||||||||
| Method | Gene |
