WormBase Tree Display for Gene: WBGene00007543
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| WBGene00007543 | SMap | S_parent | Sequence | C12D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fipr-7 | Person_evidence | WBPerson168 | |||||
| Sequence_name | C12D8.16 | ||||||||
| Molecular_name | C12D8.16 | ||||||||
| C12D8.16.1 | |||||||||
| CE34683 | |||||||||
| Other_name | CELE_C12D8.16 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fipr-7 | ||||||||
| DB_info | Database | AceView | gene | 5K709 | |||||
| WormQTL | gene | WBGene00007543 | |||||||
| WormFlux | gene | WBGene00007543 | |||||||
| NDB | locus_tag | CELE_C12D8.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007543|UniProtKB=Q7YTS1 | |||||||
| family | PTHR22552 | ||||||||
| NCBI | gene | 259643 | |||||||
| RefSeq | protein | NM_001028481.6 | |||||||
| TrEMBL | UniProtAcc | Q7YTS1 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YTS1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Apr 2007 10:48:52 | WBPerson2970 | Name_change | CGC_name | fipr-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fipr | ||||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enriched in XXX cell; arcade cell; ciliated neurons; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including methylmercury hydroxide; manganese chloride; and multi-walled carbon nanotube based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C12D8.16 | |||||||
| Corresponding_transcript | C12D8.16.1 | ||||||||
| Associated_feature | WBsf647144 | ||||||||
| WBsf1001075 | |||||||||
| WBsf1020278 | |||||||||
| WBsf232346 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010655 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1014437 | ||||||||
| Expr1144458 | |||||||||
| Expr2011790 | |||||||||
| Expr2030028 | |||||||||
| Drives_construct | WBCnstr00033661 | ||||||||
| Construct_product | WBCnstr00033661 | ||||||||
| Microarray_results | A_12_P115592 | ||||||||
| GPL14144_C12D8.16_161-220_0.965_1_A | |||||||||
| GPL19516_CGZ0004343 | |||||||||
| GPL21109_C12D8.16 | |||||||||
| GPL8304_CE_WBGene00007543_A | |||||||||
| GPL8673_C12D8_16P00001 | |||||||||
| GPL8673_C12D8_16P00062 | |||||||||
| GPL8673_C12D8_16P00132 | |||||||||
| Expression_cluster (135) | |||||||||
| Map_info | Map | V | Position | 2.38936 | Error | 0.001388 | |||
| Positive | Positive_clone | C12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064648 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
