WormBase Tree Display for Gene: WBGene00007493
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| WBGene00007493 | SMap | S_parent | Sequence | C09G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npp-23 | Person_evidence | WBPerson1780 | |||||
| Sequence_name | C09G9.2 | ||||||||
| Molecular_name | C09G9.2a | ||||||||
| C09G9.2a.1 | |||||||||
| CE35389 | |||||||||
| C09G9.2b | |||||||||
| CE42621 | |||||||||
| C09G9.2b.1 | |||||||||
| Other_name | CELE_C09G9.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | npp-23 | ||||||||
| DB_info | Database | AceView | gene | 4J632 | |||||
| WormQTL | gene | WBGene00007493 | |||||||
| WormFlux | gene | WBGene00007493 | |||||||
| NDB | locus_tag | CELE_C09G9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007493|UniProtKB=Q17872 | |||||||
| family | PTHR22652 | ||||||||
| NCBI | gene | 182462 | |||||||
| RefSeq | protein | NM_069136.4 | |||||||
| NM_001136373.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF321692 | |||||||
| TrEMBL | UniProtAcc | Q17872 | |||||||
| B3GWB1 | |||||||||
| UniProt_GCRP | UniProtAcc | Q17872 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jan 2012 11:54:45 | WBPerson2970 | Name_change | CGC_name | npp-23 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npp | ||||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005958 | ||||||||
| 00005959 | |||||||||
| 00059511 | |||||||||
| 00059512 | |||||||||
| Contained_in_operon | CEOP4310 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Located in kinetochore. Part of nuclear pore. Is an ortholog of human NUP43 (nucleoporin 43). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C09G9.2a | |||||||
| C09G9.2b | |||||||||
| Corresponding_CDS_history | C09G9.2:wp109 | ||||||||
| Corresponding_transcript | C09G9.2a.1 | ||||||||
| C09G9.2b.1 | |||||||||
| Other_sequence | CBC01902_1 | ||||||||
| Associated_feature | WBsf652021 | ||||||||
| WBsf230484 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040244 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010553 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028744 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023502 | ||||||||
| Expr1033223 | |||||||||
| Expr1144314 | |||||||||
| Expr2014383 | |||||||||
| Expr2032624 | |||||||||
| Drives_construct | WBCnstr00033697 | ||||||||
| Construct_product | WBCnstr00009670 | ||||||||
| WBCnstr00033697 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction | WBInteraction000312030 | ||||||||
| WBInteraction000325692 | |||||||||
| WBInteraction000369284 | |||||||||
| WBInteraction000452996 | |||||||||
| WBInteraction000519316 | |||||||||
| WBInteraction000559873 | |||||||||
| WBInteraction000574914 | |||||||||
| WBInteraction000575755 | |||||||||
| Map_info | Map | IV | Position | 3.98817 | |||||
| Positive | Positive_clone | C09G9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
