WormBase Tree Display for Gene: WBGene00007490
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| WBGene00007490 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | mks-5 | Paper_evidence | WBPaper00035930 | |||||
| Person_evidence | WBPerson2136 | ||||||||
| Sequence_name | C09G5.8 | ||||||||
| Molecular_name | C09G5.8a | ||||||||
| C09G5.8a.1 | |||||||||
| CE46403 | |||||||||
| C09G5.8b | |||||||||
| CE43165 | |||||||||
| C09G5.8b.1 | |||||||||
| C09G5.8c | |||||||||
| Other_name | nphp-8 | Paper_evidence | WBPaper00039789 | ||||||
| CELE_C09G5.8 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | mks-5 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 May 2011 09:59:40 | WBPerson2970 | Name_change | CGC_name | mks-5 | ||||
| 3 | 12 Jul 2011 12:02:07 | WBPerson2970 | Name_change | Other_name | nphp-8 | ||||
| 4 | 01 Aug 2011 13:08:52 | WBPerson1983 | Event | Split_into | WBGene00206538 | ||||
| Split_into | WBGene00206538 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mks | ||||||||
| Allele (134) | |||||||||
| Strain | WBStrain00033249 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (29) | |||||||||
| Contained_in_operon | CEOP2001 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00206538 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Involved in several processes, including non-motile cilium assembly; protein localization to cilium; and protein to membrane docking. Located in ciliary basal body and ciliary transition zone. Expressed in chemosensory neurons and ciliated neurons. Used to study ciliopathy. Human ortholog(s) of this gene implicated in several diseases, including Joubert syndrome 7; Leber hereditary optic neuropathy; and retinal disease (multiple). Is an ortholog of human RPGRIP1L (RPGRIP1 like). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:0060340 | |||||||
| Potential_model (14) | |||||||||
| Models_disease_asserted | WBDOannot00000136 | ||||||||
| Molecular_info | Corresponding_CDS | C09G5.8a | |||||||
| C09G5.8b | |||||||||
| Corresponding_CDS_history | C09G5.8:wp20 | ||||||||
| C09G5.8:wp196 | |||||||||
| C09G5.8a:wp227 | |||||||||
| Corresponding_transcript | C09G5.8c | ||||||||
| C09G5.8a.1 | |||||||||
| C09G5.8b.1 | |||||||||
| Other_sequence | MH10612 | ||||||||
| CR10647 | |||||||||
| CRC07282_1 | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010551 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000994 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012286 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040242 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103228 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023041 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030069 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9595 | ||||||||
| Expr14488 | |||||||||
| Expr15048 | |||||||||
| Expr16116 | |||||||||
| Expr1028865 | |||||||||
| Expr1033221 | |||||||||
| Expr1144312 | |||||||||
| Expr2013585 | |||||||||
| Expr2031818 | |||||||||
| Drives_construct | WBCnstr00008881 | ||||||||
| WBCnstr00008882 | |||||||||
| WBCnstr00008883 | |||||||||
| WBCnstr00008885 | |||||||||
| WBCnstr00014159 | |||||||||
| WBCnstr00033699 | |||||||||
| Construct_product | WBCnstr00008881 | ||||||||
| WBCnstr00008882 | |||||||||
| WBCnstr00008883 | |||||||||
| WBCnstr00008885 | |||||||||
| WBCnstr00014159 | |||||||||
| WBCnstr00033699 | |||||||||
| WBCnstr00041897 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (162) | |||||||||
| Interaction | WBInteraction000112118 | ||||||||
| WBInteraction000146717 | |||||||||
| WBInteraction000213713 | |||||||||
| WBInteraction000237650 | |||||||||
| WBInteraction000297352 | |||||||||
| WBInteraction000308315 | |||||||||
| WBInteraction000318031 | |||||||||
| WBInteraction000344936 | |||||||||
| WBInteraction000381704 | |||||||||
| WBInteraction000522459 | |||||||||
| Map_info | Map | II | Position | 3.12442 | Error | 0.000109 | |||
| Positive | Positive_clone | C09G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (25) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
