WormBase Tree Display for Gene: WBGene00007425
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WBGene00007425 | SMap | S_parent | Sequence | C08B6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | cht-5 | Person_evidence | WBPerson1820 | |||||
Sequence_name | C08B6.4 | ||||||||
Molecular_name | C08B6.4a | ||||||||
C08B6.4a.1 | |||||||||
CE05241 | |||||||||
C08B6.4b | |||||||||
CE37189 | |||||||||
C08B6.4b.1 | |||||||||
Other_name | CELE_C08B6.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | cht-5 | ||||||||
DB_info | Database | AceView | gene | 5K597 | |||||
WormQTL | gene | WBGene00007425 | |||||||
WormFlux | gene | WBGene00007425 | |||||||
NDB | locus_tag | CELE_C08B6.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007425|UniProtKB=Q65ZB0 | |||||||
family | PTHR47836 | ||||||||
NCBI | gene | 179407 | |||||||
RefSeq | protein | NM_001028464.3 | |||||||
NM_001380734.2 | |||||||||
TREEFAM | TREEFAM_ID | TF318917 | |||||||
TrEMBL | UniProtAcc | Q17816 | |||||||
Q65ZB0 | |||||||||
UniProt_GCRP | UniProtAcc | Q65ZB0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | cht-5 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cht | ||||||||
Allele (55) | |||||||||
Strain | WBStrain00031715 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00059291 | ||||||||
00115552 | |||||||||
00115553 | |||||||||
00115554 | |||||||||
Ortholog (30) | |||||||||
Paralog | WBGene00011196 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020270 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012057 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable chitinase activity. Predicted to be involved in cell wall macromolecule catabolic process and chitin catabolic process. Expressed in amphid neurons and hypodermis. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C08B6.4a | |||||||
C08B6.4b | |||||||||
Corresponding_transcript | C08B6.4a.1 | ||||||||
C08B6.4b.1 | |||||||||
Other_sequence (33) | |||||||||
Associated_feature | WBsf647132 | ||||||||
WBsf661612 | |||||||||
WBsf661613 | |||||||||
WBsf1001063 | |||||||||
WBsf232329 | |||||||||
WBsf232330 | |||||||||
WBsf232331 | |||||||||
Experimental_info | RNAi_result | WBRNAi00010431 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040073 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028660 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr13668 | ||||||||
Expr1026702 | |||||||||
Expr1033197 | |||||||||
Expr1144141 | |||||||||
Expr2000599 | |||||||||
Expr2018826 | |||||||||
Drives_construct (2) | |||||||||
Construct_product | WBCnstr00033747 | ||||||||
Microarray_results (25) | |||||||||
Expression_cluster (208) | |||||||||
Interaction (25) | |||||||||
Map_info | Map | V | Position | 2.27628 | |||||
Positive | Positive_clone | C08B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00012363 | ||||||||
WBPaper00013158 | |||||||||
WBPaper00026214 | |||||||||
WBPaper00064648 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |