WormBase Tree Display for Gene: WBGene00007400
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| WBGene00007400 | SMap | S_parent | Sequence | C07A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bud-31 | |||||||
| Sequence_name | C07A9.2 | ||||||||
| Molecular_name | C07A9.2 | ||||||||
| C07A9.2.1 | |||||||||
| CE00499 | |||||||||
| C07A9.2.2 | |||||||||
| Other_name | 3J784 | Accession_evidence | EMBL | AF303257 | |||||
| CELE_C07A9.2 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | bud-31 | ||||||||
| DB_info | Database | AceView | gene | 3K784 | |||||
| WormQTL | gene | WBGene00007400 | |||||||
| WormFlux | gene | WBGene00007400 | |||||||
| NDB | locus_tag | CELE_C07A9.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007400|UniProtKB=P34313 | |||||||
| family | PTHR19411 | ||||||||
| NCBI | gene | 176368 | |||||||
| RefSeq | protein | NM_001379868.1 | |||||||
| SwissProt | UniProtAcc | P34313 | |||||||
| TREEFAM | TREEFAM_ID | TF105609 | |||||||
| UniProt_GCRP | UniProtAcc | P34313 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 Apr 2017 11:17:23 | WBPerson2970 | Name_change | CGC_name | bud-31 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bud | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00051144 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00041550 | ||||||||
| 00041551 | |||||||||
| 00041552 | |||||||||
| 00041553 | |||||||||
| 00041554 | |||||||||
| 00041555 | |||||||||
| 00041556 | |||||||||
| 00115537 | |||||||||
| Contained_in_operon | CEOP3612 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Is an ortholog of human BUD31 (BUD31 homolog). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C07A9.2 | |||||||
| Corresponding_transcript | C07A9.2.1 | ||||||||
| C07A9.2.2 | |||||||||
| Other_sequence (74) | |||||||||
| Associated_feature | WBsf651395 | ||||||||
| WBsf651396 | |||||||||
| WBsf667314 | |||||||||
| WBsf667315 | |||||||||
| WBsf667316 | |||||||||
| WBsf993765 | |||||||||
| WBsf993766 | |||||||||
| WBsf1015654 | |||||||||
| WBsf1015655 | |||||||||
| WBsf227352 | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Expr1015684 | ||||||||
| Expr1033185 | |||||||||
| Expr1144053 | |||||||||
| Expr2009682 | |||||||||
| Expr2027921 | |||||||||
| Drives_construct | WBCnstr00033770 | ||||||||
| Construct_product | WBCnstr00033770 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction (102) | |||||||||
| Map_info | Map | III | Position | 0.890235 | |||||
| Positive | Positive_clone | C07A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00045396 | |||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
