WormBase Tree Display for Gene: WBGene00007396

WBGene00007396 SMap: S_parent: Sequence: C07A4
  Identity: Version: 3
    Name: CGC_name: rnp-9 Person_evidence: WBPerson1352
      Sequence_name: C07A4.1
      Molecular_name: C07A4.1
        C07A4.1.1
        CE53321
      Other_name: tiar-3
        CELE_C07A4.1 Accession_evidence: NDB BX284606
      Public_name: rnp-9
    DB_info: Database: AceView gene XK787
        WormQTL gene WBGene00007396
        WormFlux gene WBGene00007396
        NDB locus_tag CELE_C07A4.1
        Panther gene CAEEL|WormBase=WBGene00007396|UniProtKB=Q93194
          family PTHR24012
        NCBI gene 182350
        RefSeq protein NM_001373461.3
        TREEFAM TREEFAM_ID TF312915
        TrEMBL UniProtAcc Q93194
        UniProt_GCRP UniProtAcc Q93194
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Aug 2010 10:05:58 WBPerson2970 Name_change: CGC_name: tiar-3
        3 02 Jul 2019 16:36:32 WBPerson1983 Name_change: CGC_name: rnp-9
                Other_name: tiar-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rnp
    Allele (68)
    Strain: WBStrain00003941
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (28)
    Paralog (20)
    Structured_description: Automated_description: Predicted to enable mRNA 3'-UTR binding activity; poly(A) binding activity; and poly(U) RNA binding activity. Involved in several processes, including determination of adult lifespan; hyperosmotic response; and response to heat. Located in nucleus. Expressed in head neurons; spermatheca; tail neurons; and ventral nerve cord. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C07A4.1
    Corresponding_CDS_history: C07A4.1:wp179
      C07A4.1:wp196
      C07A4.1:wp271
    Corresponding_transcript: C07A4.1.1
    Other_sequence: ACC16599_1
      Acan_isotig10233
      JI469881.1
      Oden_isotig23107
      EX551025.1
    Associated_feature: WBsf1006634
      WBsf1006635
      WBsf1006636
      WBsf1023674
      WBsf1023675
      WBsf1023676
      WBsf236251
  Experimental_info: RNAi_result: WBRNAi00083652 Inferred_automatically: RNAi_primary
      WBRNAi00039967 Inferred_automatically: RNAi_primary
      WBRNAi00098568 Inferred_automatically: RNAi_primary
      WBRNAi00010360 Inferred_automatically: RNAi_primary
      WBRNAi00083751 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11902
      Expr1012539
      Expr1144045
      Expr2017397
      Expr2035536
    Drives_construct: WBCnstr00019825
      WBCnstr00033774
    Construct_product: WBCnstr00019825
      WBCnstr00033774
    Microarray_results (19)
    Expression_cluster (115)
    Interaction: WBInteraction000217012
      WBInteraction000259006
      WBInteraction000342257
      WBInteraction000444553
      WBInteraction000452503
      WBInteraction000466310
      WBInteraction000473516
  Map_info: Map: X Position: 1.86793 Error: 0.002267
    Positive: Positive_clone: C07A4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00039520
    WBPaper00043745
    WBPaper00045542
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene