WormBase Tree Display for Gene: WBGene00007390
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| WBGene00007390 | SMap | S_parent | Sequence | C06H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lmtr-3 | Person_evidence | WBPerson4071 | |||||
| WBPerson26839 | |||||||||
| Sequence_name | C06H2.6 | ||||||||
| Molecular_name | C06H2.6a | ||||||||
| C06H2.6a.1 | |||||||||
| CE29664 | |||||||||
| C06H2.6b | |||||||||
| CE48365 | |||||||||
| C06H2.6a.2 | |||||||||
| C06H2.6b.1 | |||||||||
| Other_name | CELE_C06H2.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | lmtr-3 | ||||||||
| DB_info | Database | AceView | gene | 5L603 | |||||
| WormQTL | gene | WBGene00007390 | |||||||
| WormFlux | gene | WBGene00007390 | |||||||
| NDB | locus_tag | CELE_C06H2.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007390|UniProtKB=Q8WQG5 | |||||||
| family | PTHR13378 | ||||||||
| NCBI | gene | 259649 | |||||||
| RefSeq | protein | NM_001307765.3 | |||||||
| NM_001380756.3 | |||||||||
| TrEMBL | UniProtAcc | Q8WQG5 | |||||||
| N1NTE7 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8WQG5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Feb 2015 13:16:53 | WBPerson2970 | Name_change | CGC_name | lmtr-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lmtr | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024352 | ||||||||
| 00024353 | |||||||||
| 00024354 | |||||||||
| 00115531 | |||||||||
| Contained_in_operon | CEOP5276 | ||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in cellular response to amino acid stimulus and positive regulation of TOR signaling. Predicted to be part of Ragulator complex. Is an ortholog of human LAMTOR3 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06H2.6a | |||||||
| C06H2.6b | |||||||||
| Corresponding_transcript | C06H2.6a.1 | ||||||||
| C06H2.6a.2 | |||||||||
| C06H2.6b.1 | |||||||||
| Other_sequence | CBC16817_1 | ||||||||
| Associated_feature | WBsf647232 | ||||||||
| WBsf977283 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00080584 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr13441 | ||||||||
| Expr1023861 | |||||||||
| Expr1033182 | |||||||||
| Expr1144030 | |||||||||
| Expr2013238 | |||||||||
| Expr2031469 | |||||||||
| Drives_construct | WBCnstr00033778 | ||||||||
| Construct_product | WBCnstr00033778 | ||||||||
| WBCnstr00039535 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (78) | |||||||||
| Interaction | WBInteraction000031985 | ||||||||
| WBInteraction000384398 | |||||||||
| WBInteraction000513956 | |||||||||
| WBInteraction000513958 | |||||||||
| Map_info | Map | V | Position | 2.95314 | |||||
| Positive | Positive_clone | C06H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024200 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (2.9528) | |||||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (2.952) | |||||||||
| Method | Gene |
