WormBase Tree Display for Gene: WBGene00007355
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| WBGene00007355 | SMap | S_parent | Sequence | C06A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rpb-6 | Person_evidence | WBPerson1787 | |||||
| Sequence_name | C06A1.5 | ||||||||
| Molecular_name | C06A1.5 | ||||||||
| C06A1.5.1 | |||||||||
| CE02117 | |||||||||
| Other_name | CELE_C06A1.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | rpb-6 | ||||||||
| DB_info | Database | AceView | gene | 2K871 | |||||
| WormQTL | gene | WBGene00007355 | |||||||
| WormFlux | gene | WBGene00007355 | |||||||
| NDB | locus_tag | CELE_C06A1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007355|UniProtKB=Q17684 | |||||||
| family | PTHR10773 | ||||||||
| NCBI | gene | 174630 | |||||||
| RefSeq | protein | NM_063877.5 | |||||||
| SwissProt | UniProtAcc | Q17684 | |||||||
| TREEFAM | TREEFAM_ID | TF103041 | |||||||
| UniProt_GCRP | UniProtAcc | Q17684 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Oct 2007 14:17:58 | WBPerson2970 | Name_change | CGC_name | rpb-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpb | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar01498435 | |||||||||
| WBVar00376445 | |||||||||
| WBVar00376446 | |||||||||
| WBVar00763526 | |||||||||
| WBVar00763527 | |||||||||
| WBVar00763528 | |||||||||
| WBVar01498940 | |||||||||
| WBVar01499862 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Contained_in_operon | CEOP2496 | ||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and DNA-directed 5'-3' RNA polymerase activity. Predicted to contribute to RNA polymerase I activity; RNA polymerase II activity; and RNA polymerase III activity. Involved in developmental process and reproduction. Predicted to be located in nucleus. Predicted to be part of RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Is an ortholog of human POLR2F (RNA polymerase II, I and III subunit F). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06A1.5 | |||||||
| Corresponding_transcript | C06A1.5.1 | ||||||||
| Other_sequence (76) | |||||||||
| Associated_feature | WBsf981272 | ||||||||
| WBsf989401 | |||||||||
| WBsf989402 | |||||||||
| WBsf989403 | |||||||||
| WBsf989404 | |||||||||
| WBsf1013051 | |||||||||
| WBsf1013052 | |||||||||
| WBsf222029 | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr1011827 | ||||||||
| Expr1033169 | |||||||||
| Expr1143890 | |||||||||
| Expr2015426 | |||||||||
| Expr2033661 | |||||||||
| Drives_construct | WBCnstr00033805 | ||||||||
| Construct_product | WBCnstr00033805 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (238) | |||||||||
| Map_info | Map | II | Position | 3.09766 | Error | 0.006838 | |||
| Positive | Positive_clone | C06A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029038 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061786 | |||||||||
| WBPaper00064641 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
