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WormBase Tree Display for Gene: WBGene00007322

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Name Class

WBGene00007322SMapS_parentSequenceC05B5
IdentityVersion2
NameSequence_nameC05B5.5
Molecular_nameC05B5.5a
C05B5.5a.1
CE40686
C05B5.5a.2
C05B5.5b
Other_nameCELE_C05B5.5Accession_evidenceNDBBX284603
Public_nameC05B5.5
DB_infoDatabaseAceViewgene3L93
WormQTLgeneWBGene00007322
WormFluxgeneWBGene00007322
NDBlocus_tagCELE_C05B5.5
PanthergeneCAEEL|WormBase=WBGene00007322|UniProtKB=P34293
familyPTHR21503
NCBIgene176413
RefSeqproteinNR_131451.1
NM_066818.5
SwissProtUniProtAccP34293
UniProt_GCRPUniProtAccP34293
RNAcentralURSidURS000078864B
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
211 Aug 2004 11:00:49WBPerson1983EventSplit_intoWBGene00023482
Split_intoWBGene00023482
StatusLive
Gene_infoBiotypeSO:0001217
Allele (25)
RNASeq_FPKM (74)
OrthologWBGene00031425Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
CSP29.g14875Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP39.g5850Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8021Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-C05B5.5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00571.g13017Caenorhabditis sinicaFrom_analysisWormBase-Compara
Sp34_30258300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8762Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (54)
Structured_descriptionConcise_descriptionThis gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins.Paper_evidenceWBPaper00012854
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnriched in Z1.p; Z4.a; germ line; intestine; and male distal tip cell based on proteomic; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including stavudine; Sodium Chloride; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: F-box domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC05B5.5a
Corresponding_CDS_historyC05B5.5:wp130
C05B5.5:wp171
Corresponding_transcriptC05B5.5b
C05B5.5a.1
C05B5.5a.2
Experimental_infoRNAi_resultWBRNAi00028472Inferred_automaticallyRNAi_primary
WBRNAi00039689Inferred_automaticallyRNAi_primary
WBRNAi00010172Inferred_automaticallyRNAi_primary
WBRNAi00006997Inferred_automaticallyRNAi_primary
Expr_patternExpr1018226
Expr1143788
Expr2000440
Expr2018663
Drives_constructWBCnstr00033833
Construct_productWBCnstr00033833
Microarray_results (31)
Expression_cluster (131)
InteractionWBInteraction000265451
Map_infoPositivePositive_cloneC05B5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII1.49168
ReferenceWBPaper00012854
MethodGene