WormBase Tree Display for Gene: WBGene00007283
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WBGene00007283 | SMap | S_parent | Sequence | C03E10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-222 | Person_evidence | WBPerson2531 | |||||
Sequence_name | C03E10.6 | ||||||||
Molecular_name | C03E10.6 | ||||||||
C03E10.6.1 | |||||||||
CE40829 | |||||||||
Other_name | CELE_C03E10.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | clec-222 | ||||||||
DB_info | Database | AceView | gene | 5L753 | |||||
WormQTL | gene | WBGene00007283 | |||||||
WormFlux | gene | WBGene00007283 | |||||||
NDB | locus_tag | CELE_C03E10.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007283|UniProtKB=O62024 | |||||||
family | PTHR23124 | ||||||||
NCBI | gene | 179560 | |||||||
RefSeq | protein | NM_073461.7 | |||||||
TREEFAM | TREEFAM_ID | TF315870 | |||||||
TrEMBL | UniProtAcc | O62024 | |||||||
UniProt_GCRP | UniProtAcc | O62024 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-222 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Paralog (70) | |||||||||
Structured_description | Automated_description | Enriched in germ line based on proteomic and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty-four chemicals including hydrogen sulfide; 1-methylnicotinamide; and methylmercuric chloride based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domain: C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C03E10.6 | |||||||
Corresponding_CDS_history | C03E10.6:wp173 | ||||||||
Corresponding_transcript | C03E10.6.1 | ||||||||
Associated_feature | WBsf1001310 | ||||||||
WBsf1001311 | |||||||||
WBsf232488 | |||||||||
Experimental_info | RNAi_result | WBRNAi00002250 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028394 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00039528 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010056 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013105 | ||||||||
Expr1143628 | |||||||||
Drives_construct | WBCnstr00033861 | ||||||||
Construct_product | WBCnstr00033861 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (206) | |||||||||
Interaction (120) | |||||||||
Map_info | Map | V | Position | 3.04592 | Error | 0.001877 | |||
Positive | Positive_clone | C03E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064841 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |