WormBase Tree Display for Gene: WBGene00007282
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WBGene00007282 | SMap | S_parent | Sequence | C03E10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-223 | Person_evidence | WBPerson2531 | |||
Sequence_name | C03E10.5 | ||||||
Molecular_name | C03E10.5 | ||||||
C03E10.5.1 | |||||||
CE41608 | |||||||
Other_name | CELE_C03E10.5 | Accession_evidence | NDB | BX284605 | |||
Public_name | clec-223 | ||||||
DB_info | Database | AceView | gene | 5L757 | |||
WormQTL | gene | WBGene00007282 | |||||
WormFlux | gene | WBGene00007282 | |||||
NDB | locus_tag | CELE_C03E10.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00007282|UniProtKB=O17562 | |||||
family | PTHR23124 | ||||||
NCBI | gene | 179561 | |||||
RefSeq | protein | NM_073462.5 | |||||
TrEMBL | UniProtAcc | O17562 | |||||
UniProt_GCRP | UniProtAcc | O17562 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (60) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (26) | |||||||
Structured_description | Automated_description | Expressed in spermatheca. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C03E10.5 | |||||
Corresponding_CDS_history | C03E10.5:wp183 | ||||||
Corresponding_transcript | C03E10.5.1 | ||||||
Associated_feature | WBsf1020430 | ||||||
WBsf232489 | |||||||
Experimental_info | RNAi_result | WBRNAi00028393 | Inferred_automatically | RNAi_primary | |||
WBRNAi00039527 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010056 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4166 | ||||||
Expr1022297 | |||||||
Expr1143627 | |||||||
Expr2010129 | |||||||
Expr2028370 | |||||||
Drives_construct | WBCnstr00033862 | ||||||
Construct_product | WBCnstr00033862 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (231) | |||||||
SAGE_tag | SAGE:gaggacaaac | Strand | Antisense | ||||
SAGE:taacattcaa | Strand | Antisense | |||||
SAGE:attcagtagagtctgtt | Strand | Antisense | |||||
SAGE:attcagtaga | Strand | Antisense | |||||
SAGE:caaagagtct | Strand | Antisense | |||||
SAGE:gggttgatcg | Strand | Antisense | |||||
SAGE:tcagggcgtgtactgga | Strand | Sense | |||||
Unambiguously_mapped | |||||||
SAGE:aaattgttct | Strand | Sense | |||||
Unambiguously_mapped | |||||||
SAGE:aaaactttag | Strand | Antisense | |||||
SAGE:tataacattt | Strand | Sense | |||||
Unambiguously_mapped | |||||||
Interaction | WBInteraction000122010 | ||||||
WBInteraction000391433 | |||||||
WBInteraction000567892 | |||||||
Map_info | Map | V | Position | 3.05059 | Error | 0.001929 | |
Positive | Positive_clone | C03E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031002 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |