WormBase Tree Display for Gene: WBGene00007250

WBGene00007250 SMap: S_parent: Sequence: C01G12
  Identity: Version: 2
    Name: CGC_name: nspb-8 Person_evidence: WBPerson655
      Sequence_name: C01G12.10
      Molecular_name: C01G12.10
        C01G12.10.1
        CE34645
      Other_name: CELE_C01G12.10 Accession_evidence: NDB BX284602
      Public_name: nspb-8
    DB_info: Database: AceView gene 2O866
        WormQTL gene WBGene00007250
        WormFlux gene WBGene00007250
        NDB locus_tag CELE_C01G12.10
        Panther gene CAEEL|WormBase=WBGene00007250|UniProtKB=Q7YX80
          family PTHR34601
        NCBI gene 3564896
        RefSeq protein NM_001026732.4
        TREEFAM TREEFAM_ID TF319416
        TrEMBL UniProtAcc Q7YX80
        UniProt_GCRP UniProtAcc Q7YX80
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 06 May 2005 10:44:15 WBPerson2970 Name_change: CGC_name: nspb-8
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspb
    Allele (12)
    RNASeq_FPKM (74)
    Ortholog (74)
    Paralog: WBGene00007243 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007246 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017305 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009398 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007251 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in MSpaaapa; arcade cell; pharyngeal cell; and pharyngeal-intestinal valve based on single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by ten chemicals including hydrogen sulfide; D-glucose; and Rifampin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1459) and Protein of unknown function DUF1459. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C01G12.10
    Corresponding_transcript: C01G12.10.1
    Associated_feature: WBsf990750
      WBsf990751
      WBsf1013866
      WBsf224294
  Experimental_info: RNAi_result: WBRNAi00039339 Inferred_automatically: RNAi_primary
      WBRNAi00009939 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016182
      Expr1143449
      Expr2014462
      Expr2032702
    Drives_construct: WBCnstr00033885
    Construct_product: WBCnstr00033885
    Microarray_results: A_12_P101867
      A_12_P141730
      GPL14144_C01G12.10_167-226_0.958_1_A
      GPL19516_CGZ0001754
      GPL19516_CGZ0001755
      GPL21109_C01G12.10.1
      GPL8304_CE_WBGene00007250_A
      GPL8673_C01G12_10P00060
      GPL8673_C01G12_10P00177
      GPL8673_C01G12_10P00181
    Expression_cluster (92)
  Map_info: Map: II Position: 23.129 Error: 0.000636
    Positive: Positive_clone: C01G12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene