WormBase Tree Display for Gene: WBGene00007179
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| WBGene00007179 | SMap | S_parent | Sequence | B0457 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0457.4 | |||||||
| Molecular_name | B0457.4 | ||||||||
| B0457.4.1 | |||||||||
| CE02948 | |||||||||
| Other_name | CELE_B0457.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | B0457.4 | ||||||||
| DB_info | Database | AceView | gene | 2J200 | |||||
| WormQTL | gene | WBGene00007179 | |||||||
| WormFlux | gene | WBGene00007179 | |||||||
| NDB | locus_tag | CELE_B0457.4 | |||||||
| NCBI | gene | 181996 | |||||||
| RefSeq | protein | NM_063495.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322005 | |||||||
| TrEMBL | UniProtAcc | Q17502 | |||||||
| UniProt_GCRP | UniProtAcc | Q17502 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g5367 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00016211 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00009143 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00011491 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00014660 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00007306 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00018127 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in AFD; germ line; somatic gonad precursor; touch receptor neurons; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; eat-2; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by six chemicals including Rifampin; allantoin; and cholesterol based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0457.4 | |||||||
| Corresponding_transcript | B0457.4.1 | ||||||||
| Associated_feature | WBsf717748 | ||||||||
| WBsf988866 | |||||||||
| WBsf988867 | |||||||||
| WBsf988868 | |||||||||
| WBsf988869 | |||||||||
| WBsf1012769 | |||||||||
| WBsf223566 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009792 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039080 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010188 | ||||||||
| Expr1143240 | |||||||||
| Expr2000197 | |||||||||
| Expr2018417 | |||||||||
| Drives_construct | WBCnstr00033943 | ||||||||
| Construct_product | WBCnstr00033943 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (61) | |||||||||
| Interaction (103) | |||||||||
| Map_info | Positive | Positive_clone | B0457 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.927562 | |||||||
| Method | Gene |
