WormBase Tree Display for Gene: WBGene00007163

WBGene00007163 SMap: S_parent: Sequence: B0391
  Identity: Version: 2
    Name: CGC_name: fbxa-154 Person_evidence: WBPerson655
      Sequence_name: B0391.6
      Molecular_name: B0391.6
        B0391.6.1
        CE33753
      Other_name: CELE_B0391.6 Accession_evidence: NDB BX284605
      Public_name: fbxa-154
    DB_info: Database: AceView gene 5Q80
        WormQTL gene WBGene00007163
        WormFlux gene WBGene00007163
        NDB locus_tag CELE_B0391.6
        Panther gene CAEEL|WormBase=WBGene00007163|UniProtKB=Q86D19
          family PTHR23015
        NCBI gene 181951
        RefSeq protein NM_001026180.4
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q86D19
        UniProt_GCRP UniProtAcc Q86D19
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-154
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (35)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5502
    Ortholog (11)
    Paralog (224)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalppppaa; ABplpppaaa; AIZ; I5 neuron; and distal tip cell based on single-cell RNA-seq; RNA-seq; and microarray studies. Is affected by several genes including eat-2; tph-1; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by seven chemicals including mianserin; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0391.6
    Corresponding_CDS_history: B0391.6:wp14
      B0391.6:wp18
      B0391.6a:wp99
      B0391.6b:wp115
    Corresponding_transcript: B0391.6.1
  Experimental_info: RNAi_result: WBRNAi00009738 Inferred_automatically: RNAi_primary
      WBRNAi00039002 Inferred_automatically: RNAi_primary
      WBRNAi00028117 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013063
      Expr1143169
      Expr2011485
      Expr2029723
    Drives_construct: WBCnstr00033956
    Construct_product: WBCnstr00033956
    Microarray_results (18)
    Expression_cluster (71)
    Interaction: WBInteraction000151244
      WBInteraction000271854
      WBInteraction000273696
      WBInteraction000281339
      WBInteraction000328302
      WBInteraction000355899
  Map_info: Map: V Position: 8.42535 Error: 0.003762
    Positive: Positive_clone: B0391 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene