WormBase Tree Display for Gene: WBGene00007111

WBGene00007111 SMap: S_parent: Sequence: B0035
  Identity: Version: 2
    Name: CGC_name: sart-3 Paper_evidence: WBPaper00046572
          Person_evidence: WBPerson2384
      Sequence_name: B0035.12
      Molecular_name: B0035.12
        B0035.12.1
        CE05167
        B0035.12.2
      Other_name: CELE_B0035.12 Accession_evidence: NDB BX284604
      Public_name: sart-3
    DB_info: Database: AceView gene 4M96
        WormQTL gene WBGene00007111
        WormFlux gene WBGene00007111
        NDB locus_tag CELE_B0035.12
        Panther gene CAEEL|WormBase=WBGene00007111|UniProtKB=Q17430
          family PTHR23236
        NCBI gene 178053
        RefSeq protein NM_069735.8
        SwissProt UniProtAcc Q17430
        TREEFAM TREEFAM_ID TF317554
        UniProt_GCRP UniProtAcc Q17430
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Apr 2015 12:07:40 WBPerson2970 Name_change: CGC_name: sart-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sart
    Allele (43)
    Strain: WBStrain00049530
      WBStrain00049726
      WBStrain00049808
      WBStrain00054651
      WBStrain00054652
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP4440
    Ortholog (38)
    Structured_description: Automated_description: Enables U4 snRNA binding activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Located in nucleoplasm. Is an ortholog of human SART3 (spliceosome associated factor 3, U4/U6 recycling protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0035.12
    Corresponding_transcript: B0035.12.1
      B0035.12.2
    Other_sequence (27)
    Associated_feature: WBsf652203
      WBsf652204
      WBsf230868
  Experimental_info: RNAi_result: WBRNAi00108603 Inferred_automatically: RNAi_primary
      WBRNAi00008281 Inferred_automatically: RNAi_primary
      WBRNAi00080233 Inferred_automatically: RNAi_primary
      WBRNAi00024351 Inferred_automatically: RNAi_primary
      WBRNAi00008102 Inferred_automatically: RNAi_primary
      WBRNAi00071466 Inferred_automatically: RNAi_primary
      WBRNAi00027954 Inferred_automatically: RNAi_primary
      WBRNAi00108678 Inferred_automatically: RNAi_primary
      WBRNAi00108689 Inferred_automatically: RNAi_primary
      WBRNAi00038670 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12516
      Expr12517
      Expr1023742
      Expr1033060
      Expr1142877
      Expr2015599
      Expr2033834
    Drives_construct: WBCnstr00033989
    Construct_product: WBCnstr00020321
      WBCnstr00020325
      WBCnstr00033989
    Microarray_results (21)
    Expression_cluster (111)
    Interaction (358)
  Map_info: Map: IV Position: 4.95957
    Positive: Positive_clone: B0035 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033003
    WBPaper00038491
    WBPaper00046572
    WBPaper00055090
    WBPaper00065306
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene