WormBase Tree Display for Gene: WBGene00007088
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| WBGene00007088 | SMap | S_parent | Sequence | B0001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0001.3 | |||||||
| Molecular_name | B0001.3a | ||||||||
| B0001.3a.1 | |||||||||
| CE29523 | |||||||||
| B0001.3b | |||||||||
| CE41344 | |||||||||
| B0001.3c | |||||||||
| CE49856 | |||||||||
| B0001.3b.1 | |||||||||
| B0001.3c.1 | |||||||||
| Other_name | CELE_B0001.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | B0001.3 | ||||||||
| DB_info | Database | AceView | gene | 4M908 | |||||
| WormQTL | gene | WBGene00007088 | |||||||
| WormFlux | gene | WBGene00007088 | |||||||
| NDB | locus_tag | CELE_B0001.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007088|UniProtKB=Q17412 | |||||||
| family | PTHR38607 | ||||||||
| NCBI | gene | 178163 | |||||||
| RefSeq | protein | NM_001129281.5 | |||||||
| NM_001306941.2 | |||||||||
| NM_001392408.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF350197 | |||||||
| TrEMBL | UniProtAcc | A7LPH1 | |||||||
| Q17412 | |||||||||
| A0A061ACH8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q17412 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (39) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4500 | ||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00007090 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007093 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell; germ line; sensory neurons; and somatic gonad precursor based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including skn-1; sir-2.1; and fbf-1 based on RNA-seq and microarray studies. Is affected by eleven chemicals including D-glucose; Alovudine; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0001.3a | |||||||
| B0001.3b | |||||||||
| B0001.3c | |||||||||
| Corresponding_CDS_history | B0001.3:wp67 | ||||||||
| Corresponding_transcript | B0001.3a.1 | ||||||||
| B0001.3b.1 | |||||||||
| B0001.3c.1 | |||||||||
| Associated_feature | WBsf230974 | ||||||||
| WBsf230975 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007806 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00085070 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077810 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009541 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038633 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013214 | ||||||||
| Expr1033042 | |||||||||
| Expr1142843 | |||||||||
| Expr2000016 | |||||||||
| Expr2018231 | |||||||||
| Drives_construct | WBCnstr00034009 | ||||||||
| Construct_product | WBCnstr00034009 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (62) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | B0001 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 5.73855 | |||||||
| Method | Gene |
