WormBase Tree Display for Gene: WBGene00007018

WBGene00007018 Evidence: Author_evidence: Bourbon H-M
  SMap: S_parent: Sequence: C55B7
  Identity: Version: 2
    Name: CGC_name: mdt-18
      Sequence_name: C55B7.9
      Molecular_name: C55B7.9a
        C55B7.9a.1
        CE09020
        C55B7.9b
        CE51480
        C55B7.9a.2
        C55B7.9a.3
        C55B7.9b.1
      Other_name: let-604 Person_evidence: WBPerson533
        CELE_C55B7.9 Accession_evidence: NDB BX284601
      Public_name: mdt-18
    DB_info: Database: AceView gene 1H70
        WormQTL gene WBGene00007018
        WormFlux gene WBGene00007018
        NDB locus_tag CELE_C55B7.9
        Panther gene CAEEL|WormBase=WBGene00007018|UniProtKB=Q966M5
          family PTHR13321
        NCBI gene 183844
        RefSeq protein NM_001392449.1
            NM_059468.7
        SwissProt UniProtAcc Q966M5
        TrEMBL UniProtAcc A0A131MCJ5
        UniProt_GCRP UniProtAcc Q966M5
    Species: Caenorhabditis elegans
    History: Version_change: 1 14 May 2004 11:48:16 WBPerson1845 Event: Created
        2 05 Mar 2015 09:48:14 WBPerson2970 Event: Acquires_merge: WBGene00002781
              Name_change: Other_name: let-604
      Acquires_merge: WBGene00002781
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdt
    Allele (40)
    Legacy_information: [C.elegansII] h293 : sterile adult. OA1: h490 (similar). [KR]
    Strain: WBStrain00003323
      WBStrain00023756
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP1324
    Ortholog (38)
    Structured_description: Automated_description: Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II and termination of RNA polymerase II transcription. Predicted to be located in nucleus. Predicted to be part of core mediator complex and mediator complex. Is an ortholog of human MED18 (mediator complex subunit 18). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C55B7.9a
      C55B7.9b
    Corresponding_transcript: C55B7.9a.1
      C55B7.9a.2
      C55B7.9a.3
      C55B7.9b.1
    Other_sequence (47)
    Associated_feature: WBsf649241
      WBsf664342
      WBsf664343
      WBsf219596
  Experimental_info: RNAi_result (24)
    Expr_pattern: Chronogram247
      Expr1016737
      Expr1033008
      Expr1147213
      Expr2013473
      Expr2031707
    Drives_construct: WBCnstr00003794
      WBCnstr00034034
    Construct_product: WBCnstr00034034
    Microarray_results (18)
    Expression_cluster (105)
    Interaction: WBInteraction000031929
      WBInteraction000031943
      WBInteraction000125263
      WBInteraction000149446
      WBInteraction000158669
      WBInteraction000158987
      WBInteraction000158988
      WBInteraction000158989
      WBInteraction000158990
      WBInteraction000158991
      WBInteraction000158992
      WBInteraction000158993
      WBInteraction000158994
      WBInteraction000158995
      WBInteraction000158996
      WBInteraction000158997
      WBInteraction000159324
      WBInteraction000164460
      WBInteraction000169810
      WBInteraction000175012
      WBInteraction000197336
      WBInteraction000220606
      WBInteraction000220982
      WBInteraction000224306
      WBInteraction000233304
      WBInteraction000240678
      WBInteraction000242688
      WBInteraction000250815
      WBInteraction000254508
      WBInteraction000264329
      WBInteraction000284216
      WBInteraction000287632
      WBInteraction000289397
      WBInteraction000311389
      WBInteraction000311462
      WBInteraction000322378
      WBInteraction000325062
      WBInteraction000329104
      WBInteraction000334322
      WBInteraction000339097
      WBInteraction000339914
      WBInteraction000347869
      WBInteraction000347929
      WBInteraction000353918
      WBInteraction000355509
      WBInteraction000367069
      WBInteraction000377423
      WBInteraction000388399
      WBInteraction000389680
      WBInteraction000390861
      WBInteraction000392347
      WBInteraction000394988
      WBInteraction000396683
      WBInteraction000397030
      WBInteraction000405748
      WBInteraction000414593
      WBInteraction000417330
      WBInteraction000426124
      WBInteraction000428172
      WBInteraction000429034
      WBInteraction000435703
      WBInteraction000438538
      WBInteraction000438768
      WBInteraction000447669
      WBInteraction000453792
      WBInteraction000459778
      WBInteraction000460431
      WBInteraction000460840
      WBInteraction000514196
      WBInteraction000561230
      WBInteraction000580513
  Map_info: Map: I Position: 1.15876 Error: 0.001438
    Positive: Positive_clone: C55B7 Inferred_automatically: From sequence, transcript, pseudogene data
        F37E3
        K06A5
        R10A10
        T23H2
    Mapping_data: 2_point: 5231
        5230
      Pos_neg_data (14)
    Pseudo_map_position
  Reference (14)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    Locus positive method : stable transformation rescue [Clucas C][021125 ck1]
    Locus complementation data : Cosmid mix R10A10, F37E3, T23H2, K06A5 and C55B7 rescues let-604. Injections performed on dpy-5(e61)let-604(h293)unc-13(e450)/+ strain and analysed for fertile DpyUncs [Clucas C][021125 ck1]
    Postitive method is stable transformation rescue
  Method: Gene