WormBase Tree Display for Gene: WBGene00006956
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| WBGene00006956 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Person_evidence | WBPerson83 | ||||||||
| SMap | S_parent | Sequence | ZK1290 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | wrt-10 | Person_evidence | WBPerson83 | |||||
| Sequence_name | ZK1290.8 | ||||||||
| Molecular_name | ZK1290.8 | ||||||||
| ZK1290.8.1 | |||||||||
| CE02087 | |||||||||
| Other_name | CELE_ZK1290.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | wrt-10 | ||||||||
| DB_info | Database | AceView | gene | 2H824 | |||||
| WormQTL | gene | WBGene00006956 | |||||||
| WormFlux | gene | WBGene00006956 | |||||||
| NDB | locus_tag | CELE_ZK1290.8 | |||||||
| NCBI | gene | 174224 | |||||||
| RefSeq | protein | NM_063179.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315615 | |||||||
| TrEMBL | UniProtAcc | Q09635 | |||||||
| UniProt_GCRP | UniProtAcc | Q09635 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | wrt | ||||||||
| Allele (32) | |||||||||
| Strain | WBStrain00047059 | ||||||||
| WBStrain00047060 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Concise_description | wrt-10 encodes a hedgehog-like protein, with an N-terminal signalsequence, a Wart domain, and a C-terminal region of low-complexitysequence; WRT-10 is expressed in both male and hermaphrodite intestine;the Wart domain is predicted to form a cysteine-crosslinked proteininvolved in intercellular signalling, and it has subtle similarity tothe N-terminal Hedge domain of HEDGEHOG proteins; WRT-10 is required fornormal growth to full size and locomotion; both of these requirementsmay reflect common defects in cholesterol-dependent hedgehog-likesignalling or in vesicle trafficking. | Paper_evidence | WBPaper00003717 | |||||
| WBPaper00026629 | |||||||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
| Automated_description | Expressed in hypodermis; interfacial epithelial cell; and intestine. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1290.8 | |||||||
| Corresponding_transcript | ZK1290.8.1 | ||||||||
| Other_sequence | MHC00953_1 | ||||||||
| MIC04419_1 | |||||||||
| AA294416.1 | |||||||||
| OVC00480_1 | |||||||||
| JO472733.1 | |||||||||
| EX010241.1 | |||||||||
| EX007162.1 | |||||||||
| AA294323.1 | |||||||||
| BF727571.1 | |||||||||
| EX913269.1 | |||||||||
| CR07824 | |||||||||
| MH01486 | |||||||||
| FD517075.1 | |||||||||
| PPC17903_1 | |||||||||
| AI053015.1 | |||||||||
| JI462889.1 | |||||||||
| FD514596.1 | |||||||||
| Dviv_isotig25202 | |||||||||
| BF400335.1 | |||||||||
| PTC03658_1 | |||||||||
| CBC00114_1 | |||||||||
| SSC02590_1 | |||||||||
| FD515696.1 | |||||||||
| BG809078.1 | |||||||||
| PPC13137_1 | |||||||||
| CRC02072_1 | |||||||||
| ES411653.1 | |||||||||
| PT04202 | |||||||||
| SS02794 | |||||||||
| MAC00719_1 | |||||||||
| BF400403.1 | |||||||||
| CR03434 | |||||||||
| MJC00952_1 | |||||||||
| MI05145 | |||||||||
| CSC01214_1 | |||||||||
| MJ01901 | |||||||||
| Hbac_isotig03651 | |||||||||
| PT03964 | |||||||||
| Oden_isotig22179 | |||||||||
| JI182494.1 | |||||||||
| BF400347.1 | |||||||||
| CJC04280_1 | |||||||||
| HBC12018_1 | |||||||||
| EX911442.1 | |||||||||
| AA293990.1 | |||||||||
| MA00168 | |||||||||
| AA618812.1 | |||||||||
| Associated_feature (8) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059217 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038198 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021870 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076989 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3372 | ||||||||
| Expr3387 | |||||||||
| Expr4429 | |||||||||
| Expr1012961 | |||||||||
| Expr1032967 | |||||||||
| Expr1162636 | |||||||||
| Expr2018075 | |||||||||
| Expr2036213 | |||||||||
| Drives_construct | WBCnstr00011369 | ||||||||
| WBCnstr00011991 | |||||||||
| WBCnstr00034072 | |||||||||
| Construct_product | WBCnstr00034072 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (328) | |||||||||
| Interaction (79) | |||||||||
| WBProcess | WBbiopr:00000123 | ||||||||
| Map_info | Map | II | Position | 0.503783 | Error | 5.6e-05 | |||
| Positive | Positive_clone | ZK1290 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
