WormBase Tree Display for Gene: WBGene00006956
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| WBGene00006956 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Person_evidence | WBPerson83 | ||||||||
| SMap | S_parent | Sequence | ZK1290 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | wrt-10 | Person_evidence | WBPerson83 | |||||
| Sequence_name | ZK1290.8 | ||||||||
| Molecular_name | ZK1290.8 | ||||||||
| ZK1290.8.1 | |||||||||
| CE02087 | |||||||||
| Other_name | CELE_ZK1290.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | wrt-10 | ||||||||
| DB_info | Database | AceView | gene | 2H824 | |||||
| WormQTL | gene | WBGene00006956 | |||||||
| WormFlux | gene | WBGene00006956 | |||||||
| NDB | locus_tag | CELE_ZK1290.8 | |||||||
| NCBI | gene | 174224 | |||||||
| RefSeq | protein | NM_063179.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315615 | |||||||
| TrEMBL | UniProtAcc | Q09635 | |||||||
| UniProt_GCRP | UniProtAcc | Q09635 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | wrt | ||||||||
| Allele (32) | |||||||||
| Strain | WBStrain00047059 | ||||||||
| WBStrain00047060 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Concise_description | wrt-10 encodes a hedgehog-like protein, with an N-terminal signalsequence, a Wart domain, and a C-terminal region of low-complexitysequence; WRT-10 is expressed in both male and hermaphrodite intestine;the Wart domain is predicted to form a cysteine-crosslinked proteininvolved in intercellular signalling, and it has subtle similarity tothe N-terminal Hedge domain of HEDGEHOG proteins; WRT-10 is required fornormal growth to full size and locomotion; both of these requirementsmay reflect common defects in cholesterol-dependent hedgehog-likesignalling or in vesicle trafficking. | Paper_evidence | WBPaper00003717 | |||||
| WBPaper00026629 | |||||||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
| Automated_description | Expressed in hypodermis; interfacial epithelial cell; and intestine. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1290.8 | |||||||
| Corresponding_transcript | ZK1290.8.1 | ||||||||
| Other_sequence (47) | |||||||||
| Associated_feature | WBsf650234 | ||||||||
| WBsf665695 | |||||||||
| WBsf665696 | |||||||||
| WBsf988469 | |||||||||
| WBsf1012547 | |||||||||
| WBsf223348 | |||||||||
| WBsf223349 | |||||||||
| WBsf223350 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059217 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038198 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021870 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076989 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3372 | ||||||||
| Expr3387 | |||||||||
| Expr4429 | |||||||||
| Expr1012961 | |||||||||
| Expr1032967 | |||||||||
| Expr1162636 | |||||||||
| Expr2018075 | |||||||||
| Expr2036213 | |||||||||
| Drives_construct | WBCnstr00011369 | ||||||||
| WBCnstr00011991 | |||||||||
| WBCnstr00034072 | |||||||||
| Construct_product | WBCnstr00034072 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (328) | |||||||||
| Interaction (79) | |||||||||
| WBProcess | WBbiopr:00000123 | ||||||||
| Map_info | Map | II | Position | 0.503783 | Error | 5.6e-05 | |||
| Positive | Positive_clone | ZK1290 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003717 | ||||||||
| WBPaper00026629 | |||||||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| WBPaper00028754 | |||||||||
| WBPaper00031588 | |||||||||
| WBPaper00058696 | |||||||||
| WBPaper00059378 | |||||||||
| WBPaper00059816 | |||||||||
| WBPaper00064105 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
