WormBase Tree Display for Gene: WBGene00006956
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WBGene00006956 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
---|---|---|---|---|---|---|---|---|---|
Person_evidence | WBPerson83 | ||||||||
SMap | S_parent | Sequence | ZK1290 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | wrt-10 | Person_evidence | WBPerson83 | |||||
Sequence_name | ZK1290.8 | ||||||||
Molecular_name | ZK1290.8 | ||||||||
ZK1290.8.1 | |||||||||
CE02087 | |||||||||
Other_name | CELE_ZK1290.8 | Accession_evidence | NDB | BX284602 | |||||
Public_name | wrt-10 | ||||||||
DB_info | Database | AceView | gene | 2H824 | |||||
WormQTL | gene | WBGene00006956 | |||||||
WormFlux | gene | WBGene00006956 | |||||||
NDB | locus_tag | CELE_ZK1290.8 | |||||||
NCBI | gene | 174224 | |||||||
RefSeq | protein | NM_063179.5 | |||||||
TREEFAM | TREEFAM_ID | TF315615 | |||||||
TrEMBL | UniProtAcc | Q09635 | |||||||
UniProt_GCRP | UniProtAcc | Q09635 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | wrt | ||||||||
Allele (32) | |||||||||
Strain | WBStrain00047059 | ||||||||
WBStrain00047060 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00054380 | Caenorhabditis remanei | From_analysis | OMA | |||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00033837 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
OrthoMCL | |||||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00164424 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00107924 | Pristionchus pacificus | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00128626 | Caenorhabditis japonica | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00157743 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
WBGene00158860 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
WBGene00159626 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
WBGene00232525 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
CBOVI.g12569 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP26.g6863 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g12241 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g9218 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP31.g27481 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP32.g16838 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP38.g3541 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
CSP39.g18031 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP40.g17155 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cni-wrt-10 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold629.g15040 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00169.g6171 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_09399 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_006540 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
OTIPU.nOt.2.0.1.g14679 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
Pan_g15199 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
Sp34_20252700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g5043 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00247763 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
WBGene00265610 | Strongyloides ratti | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | wrt-10 encodes a hedgehog-like protein, with an N-terminal signalsequence, a Wart domain, and a C-terminal region of low-complexitysequence; WRT-10 is expressed in both male and hermaphrodite intestine;the Wart domain is predicted to form a cysteine-crosslinked proteininvolved in intercellular signalling, and it has subtle similarity tothe N-terminal Hedge domain of HEDGEHOG proteins; WRT-10 is required fornormal growth to full size and locomotion; both of these requirementsmay reflect common defects in cholesterol-dependent hedgehog-likesignalling or in vesicle trafficking. | Paper_evidence | WBPaper00003717 | |||||
WBPaper00026629 | |||||||||
WBPaper00026841 | |||||||||
WBPaper00027263 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
Automated_description | Expressed in hypodermis; interfacial epithelial cell; and intestine. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1290.8 | |||||||
Corresponding_transcript | ZK1290.8.1 | ||||||||
Other_sequence (47) | |||||||||
Associated_feature | WBsf650234 | ||||||||
WBsf665695 | |||||||||
WBsf665696 | |||||||||
WBsf988469 | |||||||||
WBsf1012547 | |||||||||
WBsf223348 | |||||||||
WBsf223349 | |||||||||
WBsf223350 | |||||||||
Experimental_info | RNAi_result | WBRNAi00059217 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038198 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021870 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077014 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076989 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr3372 | ||||||||
Expr3387 | |||||||||
Expr4429 | |||||||||
Expr1012961 | |||||||||
Expr1032967 | |||||||||
Expr1162636 | |||||||||
Expr2018075 | |||||||||
Expr2036213 | |||||||||
Drives_construct | WBCnstr00011369 | ||||||||
WBCnstr00011991 | |||||||||
WBCnstr00034072 | |||||||||
Construct_product | WBCnstr00034072 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (328) | |||||||||
Interaction (79) | |||||||||
WBProcess | WBbiopr:00000123 | ||||||||
Map_info | Map | II | Position | 0.503783 | Error | 5.6e-05 | |||
Positive | Positive_clone | ZK1290 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |