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WormBase Tree Display for Gene: WBGene00006955

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Name Class

WBGene00006955EvidencePaper_evidenceWBPaper00003717
Person_evidenceWBPerson83
SMapS_parentSequenceB0344
IdentityVersion1
NameCGC_namewrt-9Person_evidenceWBPerson83
Sequence_nameB0344.2
Molecular_nameB0344.2
B0344.2.1
CE33963
Other_nameCELE_B0344.2Accession_evidenceNDBBX284606
Public_namewrt-9
DB_infoDatabaseAceViewgeneXC209
WormQTLgeneWBGene00006955
WormFluxgeneWBGene00006955
NDBlocus_tagCELE_B0344.2
PanthergeneCAEEL|WormBase=WBGene00006955|UniProtKB=O61737
familyPTHR46706
NCBIgene181931
RefSeqproteinNM_075897.6
TREEFAMTREEFAM_IDTF316084
TrEMBLUniProtAccO61737
UniProt_GCRPUniProtAccO61737
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classwrt
Allele (236)
StrainWBStrain00032753
RNASeq_FPKM (74)
Ortholog (29)
Paralog (24)
Structured_descriptionConcise_descriptionwrt-9 encodes a hedgehog-like protein, with an N-terminal signalsequence, a Wart domain, and a C-terminal region of proline-rich,low-complexity sequence; the Wart domain is predicted to form acysteine-crosslinked protein involved in intercellular signalling, andit has subtle similarity to the N-terminal Hedge domain of HEDGEHOGproteins; WRT-9 has no obvious function in RNAi assays.Paper_evidenceWBPaper00003717
WBPaper00026841
WBPaper00027263
Curator_confirmedWBPerson567
Date_last_updated05 Nov 2006 00:00:00
Automated_descriptionExpressed in hypodermis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0344.2
Corresponding_CDS_historyB0344.2:wp100
Corresponding_transcriptB0344.2.1
Other_sequence (25)
Associated_feature (18)
Experimental_infoRNAi_resultWBRNAi00076988Inferred_automaticallyRNAi_primary
WBRNAi00049257Inferred_automaticallyRNAi_primary
WBRNAi00009718Inferred_automaticallyRNAi_primary
WBRNAi00038955Inferred_automaticallyRNAi_primary
Expr_patternExpr4428
Expr1011448
Expr1032966
Expr1143132
Expr2018084
Expr2036222
Drives_constructWBCnstr00011990
WBCnstr00034073
Construct_productWBCnstr00034073
Microarray_results (21)
Expression_cluster (187)
Interaction (140)
WBProcessWBbiopr:00000123
Map_infoMapXPosition-17.9197Error0.024132
PositivePositive_cloneB0344Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00003717
WBPaper00026841
WBPaper00028754
WBPaper00031588
WBPaper00038491
WBPaper00064105
RemarkH02F09.1 has been merged into B0344.2Person_evidenceWBPerson1848
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene