WormBase Tree Display for Gene: WBGene00006666
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| WBGene00006666 | Evidence | Person_evidence | WBPerson655 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F20A1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | twk-11 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F20A1.7 | ||||||||
| Molecular_name | F20A1.7a | ||||||||
| F20A1.7a.1 | |||||||||
| CE52090 | |||||||||
| F20A1.7b | |||||||||
| CE39245 | |||||||||
| F20A1.7c | |||||||||
| CE39246 | |||||||||
| F20A1.7b.1 | |||||||||
| F20A1.7c.1 | |||||||||
| Other_name | CELE_F20A1.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | twk-11 | ||||||||
| DB_info | Database | AceView | gene | 5H510 | |||||
| WormQTL | gene | WBGene00006666 | |||||||
| WormFlux | gene | WBGene00006666 | |||||||
| NDB | locus_tag | CELE_F20A1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006666|UniProtKB=H2KZ66 | |||||||
| family | PTHR11003 | ||||||||
| NCBI | gene | 179088 | |||||||
| RefSeq | protein | NM_072382.9 | |||||||
| NM_001356689.2 | |||||||||
| NM_001383329.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF350403 | |||||||
| TrEMBL | UniProtAcc | H2KZ65 | |||||||
| H2KZ66 | |||||||||
| Q304E2 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ66 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | twk | ||||||||
| Allele (113) | |||||||||
| Legacy_information | [Thomas JH] twk for potassium channel family, type Twik (double P domain) | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (47) | |||||||||
| Structured_description | Concise_description | twk-11 encodes one of more than 40 TWK (two-P domain K+) potassium channels in C. elegans that contain two pore regions and four transmembrane domains; orthologous to C. briggsae CBG19123 with some similarity to Drosophila CG6004. | Paper_evidence | WBPaper00004644 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20A1.7a | |||||||
| F20A1.7b | |||||||||
| F20A1.7c | |||||||||
| Corresponding_CDS_history | F20A1.7a:wp150 | ||||||||
| F20A1.7a:wp261 | |||||||||
| F20A1.7b:wp150 | |||||||||
| F20A1.7c:wp150 | |||||||||
| Corresponding_transcript | F20A1.7a.1 | ||||||||
| F20A1.7b.1 | |||||||||
| F20A1.7c.1 | |||||||||
| Other_sequence | Oden_isotig22098 | ||||||||
| Acan_isotig05643 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045064 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013589 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017056 | ||||||||
| Expr1032768 | |||||||||
| Expr1149020 | |||||||||
| Expr2017639 | |||||||||
| Expr2035779 | |||||||||
| Drives_construct | WBCnstr00034229 | ||||||||
| Construct_product | WBCnstr00034229 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction | WBInteraction000120608 | ||||||||
| WBInteraction000126011 | |||||||||
| WBInteraction000137050 | |||||||||
| WBInteraction000303154 | |||||||||
| WBInteraction000303155 | |||||||||
| WBInteraction000469808 | |||||||||
| Map_info | Map | V | Position | 0.499774 | Error | 0.000743 | |||
| Positive | Positive_clone | F20A1 | Person_evidence | WBPerson654 | |||||
| WBPerson655 | |||||||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| F55C5 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | twk-11 was connected to F55C5.3 | Person_evidence | WBPerson655 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
