WormBase Tree Display for Gene: WBGene00006649
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WBGene00006649 | Evidence | Person_evidence | WBPerson463 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F08F1 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | tth-1 | Person_evidence | WBPerson463 | |||||
Sequence_name | F08F1.8 | ||||||||
Molecular_name | F08F1.8 | ||||||||
F08F1.8.1 | |||||||||
CE27929 | |||||||||
F08F1.8.2 | |||||||||
Other_name | CELE_F08F1.8 | Accession_evidence | NDB | BX284606 | |||||
Public_name | tth-1 | ||||||||
DB_info | Database | AceView | gene | XJ42 | |||||
WormQTL | gene | WBGene00006649 | |||||||
WormFlux | gene | WBGene00006649 | |||||||
NDB | locus_tag | CELE_F08F1.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006649|UniProtKB=O17389 | |||||||
family | PTHR20940 | ||||||||
NCBI | gene | 181097 | |||||||
RefSeq | protein | NM_077029.5 | |||||||
SwissProt | UniProtAcc | O17389 | |||||||
TREEFAM | TREEFAM_ID | TF313856 | |||||||
UniProt_GCRP | UniProtAcc | O17389 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tth | ||||||||
Allele (26) | |||||||||
Strain | WBStrain00035517 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Contained_in_operon | CEOPX100 | ||||||||
Ortholog (23) | |||||||||
Structured_description (2) | |||||||||
Molecular_info | Corresponding_CDS | F08F1.8 | |||||||
Corresponding_transcript | F08F1.8.1 | ||||||||
F08F1.8.2 | |||||||||
Other_sequence | CJC05583_1 | ||||||||
CRC01301_1 | |||||||||
CBC14720_1 | |||||||||
CR06649 | |||||||||
CR02116 | |||||||||
Associated_feature | WBsf670840 | ||||||||
WBsf1006146 | |||||||||
Experimental_info | RNAi_result | WBRNAi00044013 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012902 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033485 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr5681 | ||||||||
Expr12264 | |||||||||
Expr12265 | |||||||||
Expr1016059 | |||||||||
Expr1032763 | |||||||||
Expr1147980 | |||||||||
Expr2017564 | |||||||||
Expr2035703 | |||||||||
Drives_construct | WBCnstr00034239 | ||||||||
Construct_product | WBCnstr00034239 | ||||||||
Antibody | WBAntibody00001843 | ||||||||
Microarray_results | SMD_F08F1.8 | ||||||||
174407_at | |||||||||
182513_at | |||||||||
A_12_P107368 | |||||||||
Aff_F08F1.8 | |||||||||
GPL13394_WBGene00006649 | |||||||||
GPL13914_F08F1.8 | |||||||||
GPL14144_F08F1.8_224-283_0.940_1_A | |||||||||
GPL14144_F08F1.8_227-286_0.937_2_C | |||||||||
GPL14144_F08F1.8_51-110_0.922_3_B | |||||||||
GPL19516_CGZ0014902 | |||||||||
GPL21109_F08F1.8 | |||||||||
GPL3518_CE27929 | |||||||||
GPL8304_CE_WBGene00006649_A | |||||||||
GPL8673_F08F1_8P00113 | |||||||||
GPL8673_F08F1_8P00246 | |||||||||
GPL8673_F08F1_8P00397 | |||||||||
GPL9450_F08F1.8 | |||||||||
cea2.c.42965 | |||||||||
Expression_cluster (260) | |||||||||
Interaction | WBInteraction000038624 | ||||||||
WBInteraction000351902 | |||||||||
WBInteraction000354409 | |||||||||
WBInteraction000565556 | |||||||||
WBInteraction000578690 | |||||||||
WBInteraction000580458 | |||||||||
WBInteraction000583627 | |||||||||
WBInteraction000584010 | |||||||||
Map_info | Map | X | Position | -0.047642 | Error | 0.01533 | |||
Positive | Positive_clone | F08F1 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4919 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00023907 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |