WormBase Tree Display for Gene: WBGene00006642
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WBGene00006642 | SMap | S_parent | Sequence | F01E11 | ||
---|---|---|---|---|---|---|
Identity | Version | 2 | ||||
Name (5) | ||||||
DB_info | Database | AceView | gene | XH612 | ||
WormQTL | gene | WBGene00006642 | ||||
WormFlux | gene | WBGene00006642 | ||||
NDB | locus_tag | CELE_F01E11.4 | ||||
Panther | gene | CAEEL|WormBase=WBGene00006642|UniProtKB=Q19083 | ||||
family | PTHR19282 | |||||
NCBI | gene | 192066 | ||||
RefSeq | protein | NM_076782.4 | ||||
TrEMBL | UniProtAcc | Q19083 | ||||
UniProt_GCRP | UniProtAcc | Q19083 | ||||
Species | Caenorhabditis elegans | |||||
History | Version_change (2) | |||||
Split_into | WBGene00303051 | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | tsp | |||||
Allele (37) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00063416 | |||||
00063417 | ||||||
00114533 | ||||||
Ortholog (29) | ||||||
Paralog (20) | ||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human UPK1B (uroplakin 1B). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F01E11.4 | ||||
Corresponding_CDS_history | F01E11.4:wp230 | |||||
F01E11.4a:wp264 | ||||||
F01E11.4b:wp264 | ||||||
Corresponding_transcript | F01E11.4.1 | |||||
Other_sequence | FD515423.1 | |||||
CSC01824_1 | ||||||
Associated_feature | WBsf670673 | |||||
Experimental_info | RNAi_result | WBRNAi00043738 | Inferred_automatically | RNAi_primary | ||
Expr_pattern | Expr1026533 | |||||
Expr1147723 | ||||||
Expr2017545 | ||||||
Expr2035683 | ||||||
Drives_construct | WBCnstr00034245 | |||||
Construct_product | WBCnstr00034245 | |||||
Microarray_results (15) | ||||||
Expression_cluster (133) | ||||||
Interaction | WBInteraction000206516 | |||||
WBInteraction000345967 | ||||||
Map_info | Map | X | Position | -1.92965 | ||
Positive | Positive_clone | F01E11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |