WormBase Tree Display for Gene: WBGene00006642
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WBGene00006642 | SMap | S_parent | Sequence | F01E11 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tsp-16 | Person_evidence | WBPerson522 | |||
Sequence_name | F01E11.4 | ||||||
Molecular_name | F01E11.4 | ||||||
F01E11.4.1 | |||||||
CE47141 | |||||||
Other_name | CELE_F01E11.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | tsp-16 | ||||||
DB_info | Database | AceView | gene | XH612 | |||
WormQTL | gene | WBGene00006642 | |||||
WormFlux | gene | WBGene00006642 | |||||
NDB | locus_tag | CELE_F01E11.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00006642|UniProtKB=Q19083 | |||||
family | PTHR19282 | ||||||
NCBI | gene | 192066 | |||||
RefSeq | protein | NM_076782.4 | |||||
TrEMBL | UniProtAcc | Q19083 | |||||
UniProt_GCRP | UniProtAcc | Q19083 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Split_into | WBGene00303051 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tsp | ||||||
Allele (37) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (3) | |||||||
Ortholog (29) | |||||||
Paralog (20) | |||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human UPK1B (uroplakin 1B). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F01E11.4 | |||||
Corresponding_CDS_history | F01E11.4:wp230 | ||||||
F01E11.4a:wp264 | |||||||
F01E11.4b:wp264 | |||||||
Corresponding_transcript | F01E11.4.1 | ||||||
Other_sequence | FD515423.1 | ||||||
CSC01824_1 | |||||||
Associated_feature | WBsf670673 | ||||||
Experimental_info | RNAi_result | WBRNAi00043738 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1026533 | ||||||
Expr1147723 | |||||||
Expr2017545 | |||||||
Expr2035683 | |||||||
Drives_construct | WBCnstr00034245 | ||||||
Construct_product | WBCnstr00034245 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (133) | |||||||
Interaction | WBInteraction000206516 | ||||||
WBInteraction000345967 | |||||||
Map_info | Map | X | Position | -1.92965 | |||
Positive | Positive_clone | F01E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |