WormBase Tree Display for Gene: WBGene00006639

WBGene00006639 SMap: S_parent: Sequence: Y39B6A
  Identity: Version: 1
    Name: CGC_name: tsp-13 Person_evidence: WBPerson522
      Sequence_name: Y39B6A.6
      Molecular_name: Y39B6A.6
        Y39B6A.6.1
        CE21670
      Other_name: CELE_Y39B6A.6 Accession_evidence: NDB BX284605
      Public_name: tsp-13
    DB_info: Database: AceView gene 5T631
        WormQTL gene WBGene00006639
        WormFlux gene WBGene00006639
        NDB locus_tag CELE_Y39B6A.6
        Panther gene CAEEL|WormBase=WBGene00006639|UniProtKB=Q9NET3
          family PTHR19282
        NCBI gene 189737
        RefSeq protein NM_171602.3
        TrEMBL UniProtAcc Q9NET3
        UniProt_GCRP UniProtAcc Q9NET3
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tsp
    Allele (82)
    RNASeq_FPKM (74)
    GO_annotation: 00096449
      00096450
      00114530
    Ortholog: WBGene00063379 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039500 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00151463 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00175336 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00105493 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00226722 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3767 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11563 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1160 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5722 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19185 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6133 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3203 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3464 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9699 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12035 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_02066.g16907 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tsp-13 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold621.g6168 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03587.g30660 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04170 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_021562 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07377 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g528 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50419300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g17827 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00083226 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00242364 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00267242 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286950 Trichuris muris From_analysis: WormBase-Compara
    Paralog (20)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y39B6A.6
    Corresponding_transcript: Y39B6A.6.1
    Other_sequence (40)
    Associated_feature: WBsf1003153
  Experimental_info: RNAi_result: WBRNAi00036913 Inferred_automatically: RNAi_primary
      WBRNAi00009760 Inferred_automatically: RNAi_primary
      WBRNAi00056211 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010905
      Expr1159704
      Expr2017542
      Expr2035680
    Microarray_results (21)
    Expression_cluster (115)
  Map_info: Map: V Position: 20.208 Error: 0.001472
    Positive: Positive_clone: Y39B6A Inferred_automatically: From sequence, transcript, pseudogene data
        Y39B6B
    Pseudo_map_position
  Remark: Sequence connection updated (was Y39B6B.aa) [020620 krb]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene