WormBase Tree Display for Gene: WBGene00006633
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WBGene00006633 | SMap | S_parent | Sequence | T23D8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | tsp-7 | Person_evidence | WBPerson522 | |||||
Sequence_name | T23D8.2 | ||||||||
Molecular_name | T23D8.2 | ||||||||
T23D8.2.1 | |||||||||
CE26006 | |||||||||
Other_name | CELE_T23D8.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | tsp-7 | ||||||||
DB_info | Database | AceView | gene | 1K546 | |||||
WormQTL | gene | WBGene00006633 | |||||||
WormFlux | gene | WBGene00006633 | |||||||
NDB | locus_tag | CELE_T23D8.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006633|UniProtKB=Q9XVI4 | |||||||
family | PTHR19282 | ||||||||
NCBI | gene | 192062 | |||||||
RefSeq | protein | NM_060235.2 | |||||||
TrEMBL | UniProtAcc | Q9XVI4 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVI4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tsp | ||||||||
Allele (37) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00102500 | ||||||||
00102501 | |||||||||
00102502 | |||||||||
00114524 | |||||||||
Ortholog (41) | |||||||||
Paralog (20) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Expressed in DA neuron; head neurons; tail neurons; touch receptor neurons; and ventral cord neurons. Human ortholog(s) of this gene implicated in carotid artery disease and diabetic neuropathy. Is an ortholog of human CD63 (CD63 molecule). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:3407 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1692) | ||||
DOID:9743 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1692) | ||||||
Molecular_info | Corresponding_CDS | T23D8.2 | |||||||
Corresponding_CDS_history | T23D8.2:wp20 | ||||||||
Corresponding_transcript | T23D8.2.1 | ||||||||
Other_sequence | LSC00848_1 | ||||||||
HG06449 | |||||||||
ACC22300_1 | |||||||||
DN557812.1 | |||||||||
Dviv_isotig11837 | |||||||||
Acan_isotig09852 | |||||||||
HSC01030_1 | |||||||||
SSC02396_1 | |||||||||
CBC03691_1 | |||||||||
JI176009.1 | |||||||||
HGC06683_1 | |||||||||
HS00249 | |||||||||
Dviv_isotig11840 | |||||||||
Dviv_isotig11839 | |||||||||
Dviv_isotig11838 | |||||||||
SS02932 | |||||||||
EY465774.1 | |||||||||
Associated_feature | WBsf649536 | ||||||||
WBsf220175 | |||||||||
Experimental_info | RNAi_result | WBRNAi00053919 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035857 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113629 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1390 | ||||||||
Expr4857 | |||||||||
Expr8197 | |||||||||
Expr1011587 | |||||||||
Expr1032753 | |||||||||
Expr1157464 | |||||||||
Expr2017557 | |||||||||
Expr2035695 | |||||||||
Drives_construct | WBCnstr00009858 | ||||||||
WBCnstr00009859 | |||||||||
WBCnstr00012285 | |||||||||
WBCnstr00013172 | |||||||||
WBCnstr00034252 | |||||||||
Construct_product | WBCnstr00034252 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (190) | |||||||||
Interaction (18) | |||||||||
Map_info | Map | I | Position | 4.12425 | Error | 0.001819 | |||
Positive | Positive_clone | T23D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024163 | ||||||||
WBPaper00025141 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00052177 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00056606 | |||||||||
WBPaper00061932 | |||||||||
WBPaper00065330 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |