WormBase Tree Display for Gene: WBGene00006633

WBGene00006633 SMap: S_parent: Sequence: T23D8
  Identity: Version: 1
    Name: CGC_name: tsp-7 Person_evidence: WBPerson522
      Sequence_name: T23D8.2
      Molecular_name: T23D8.2
        T23D8.2.1
        CE26006
      Other_name: CELE_T23D8.2 Accession_evidence: NDB BX284601
      Public_name: tsp-7
    DB_info: Database: AceView gene 1K546
        WormQTL gene WBGene00006633
        WormFlux gene WBGene00006633
        NDB locus_tag CELE_T23D8.2
        Panther gene CAEEL|WormBase=WBGene00006633|UniProtKB=Q9XVI4
          family PTHR19282
        NCBI gene 192062
        RefSeq protein NM_060235.2
        TrEMBL UniProtAcc Q9XVI4
        UniProt_GCRP UniProtAcc Q9XVI4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tsp
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation: 00102500
      00102501
      00102502
      00114524
    Ortholog: WBGene00026603 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00152219 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00080006 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00079899 Caenorhabditis remanei From_analysis: OMA
            WormBase-Compara
      WBGene00123729 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00157132 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00155322 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00077281 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00063159 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00134823 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00129764 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00226207 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10573 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6586 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7306 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7835 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4513 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26841 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8156 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g9516 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16669 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g3761 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g20232 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-tsp-7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10910 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00070.g3294 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_000685 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06013 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5364 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10188800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1943 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237895 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00282310 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258505 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00295181 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0032943 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0033629 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
      ZFIN:ZDB-GENE-030131-180 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:1692 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      MGI:99529 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:62080 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            SonicParanoid
    Paralog (20)
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in DA neuron; head neurons; tail neurons; touch receptor neurons; and ventral cord neurons. Human ortholog(s) of this gene implicated in carotid artery disease and diabetic neuropathy. Is an ortholog of human CD63 (CD63 molecule). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:3407 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:1692)
      DOID:9743 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:1692)
  Molecular_info: Corresponding_CDS: T23D8.2
    Corresponding_CDS_history: T23D8.2:wp20
    Corresponding_transcript: T23D8.2.1
    Other_sequence (17)
    Associated_feature: WBsf649536
      WBsf220175
  Experimental_info: RNAi_result: WBRNAi00053919 Inferred_automatically: RNAi_primary
      WBRNAi00035857 Inferred_automatically: RNAi_primary
      WBRNAi00113629 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1390
      Expr4857
      Expr8197
      Expr1011587
      Expr1032753
      Expr1157464
      Expr2017557
      Expr2035695
    Drives_construct: WBCnstr00009858
      WBCnstr00009859
      WBCnstr00012285
      WBCnstr00013172
      WBCnstr00034252
    Construct_product: WBCnstr00034252
    Microarray_results (18)
    Expression_cluster (190)
    Interaction (18)
  Map_info: Map: I Position: 4.12425 Error: 0.001819
    Positive: Positive_clone: T23D8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024163
    WBPaper00025141
    WBPaper00038491
    WBPaper00052177
    WBPaper00055090
    WBPaper00056606
    WBPaper00061932
    WBPaper00065330
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene