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WormBase Tree Display for Gene: WBGene00006623

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Name Class

WBGene00006623EvidencePerson_evidenceWBPerson2549
WBPerson6733
SMapS_parentSequenceK07B1
IdentityVersion1
NameCGC_nametry-5
Sequence_nameK07B1.1
Molecular_nameK07B1.1
K07B1.1.1
CE45442
Other_nameCELE_K07B1.1Accession_evidenceNDBBX284605
Public_nametry-5
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:41WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtry
Allele (26)
RNASeq_FPKM (74)
GO_annotation (16)
Ortholog (32)
ParalogWBGene00006622Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011909Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00008849Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00023425Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to enable serine-type endopeptidase activity. Involved in spermatid development. Located in extracellular space and secretory vesicle. Expressed in several structures, including head; male gonad; male gonadal cell; tail; and uterus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK07B1.1
Corresponding_CDS_historyK07B1.1:wp107
K07B1.1:wp220
Corresponding_transcriptK07B1.1.1
Other_sequenceFD515862.1
CSC01216_1
Associated_featureWBsf1000873
WBsf232241
Experimental_infoRNAi_resultWBRNAi00050108Inferred_automaticallyRNAi_primary
WBRNAi00034042Inferred_automaticallyRNAi_primary
WBRNAi00016692Inferred_automaticallyRNAi_primary
Expr_patternExpr9862
Expr9863
Expr14583
Expr14585
Expr1014786
Expr1032750
Expr1153811
Expr2017529
Expr2035667
Drives_constructWBCnstr00009568
WBCnstr00009569
WBCnstr00034261
WBCnstr00040395
Construct_productWBCnstr00009569
WBCnstr00034261
WBCnstr00040395
Microarray_results (20)
Expression_clusterWBPaper00032425:up_in_lin-35
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_embryo_enriched
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:BAG-neuron_embryo_enriched
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044578:reduced-humidity_upregulated_microarray
WBPaper00044760:somatic_specific
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_upregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00049635:dop-1(vs100)_upregulated
WBPaper00050231:male_enriched
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00051558:aging_regulated
WBPaper00052856:Cadmium_regulated
WBPaper00053289:DREAM-target
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053771:up_at_3h-NaCl
WBPaper00053771:up_at_24h-NaCl
WBPaper00054493:hpl-2(tm1489)_downregulated
WBPaper00055226:ADR-2_target_adr-1(tm668)
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055565:AVK_enriched
WBPaper00055648:male-seminal-vesicle_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056330:glycine_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056826:hmc_biased
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
WBPaper00057265:metaformin_downregulated_OP50
WBPaper00057265:metaformin_downregulated_OP50-MR
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058711:paraquat_upregulated
WBPaper00058711:wdr-5(ok1417)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060703:nas-38(ok3407)_upregulated
WBPaper00061040:FW1256_downregulated
WBPaper00061340:Excretory_cell_parent
WBPaper00061340:Parents_of_Y_DA6_DA7_DA9
WBPaper00061340:Parent_of_tail_spike_and_hyp10
WBPaper00061340:PLM_ALN_great_grandparent
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061527:C10C5.2-Y58A7A.3
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00062056:lin-35(n745)_upregulated
WBPaper00062103:neuron_enriched
WBPaper00062193:daf-16(RNAi)_downregulated
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00062590:Aging_downregulated_coelomocyte
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00065029:cadmium_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
WBPaper00065841:57_0
WBPaper00065841:133_0
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4386_cluster_6_4
cgc4489_group_14
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026629:L4_male_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00034661:AgNPs_upregulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_F
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040858:eQTL_regulated_old
WBPaper00041002:HF_11d_0.2mM_Up
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:DAF-16-dependent_UV_response
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_upregulated
WBPaper00053827:pyoverdine_upregulated
WBPaper00055899:nitroguanidine_regulated
[cgc6390]:male_soma-enriched
Interaction (3)
Map_infoMapVPosition2.00536Error0.001365
PositivePositive_cloneK07B1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (32)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene