WormBase Tree Display for Gene: WBGene00006574
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| WBGene00006574 | SMap | S_parent | Sequence | DY3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tin-13 | |||||||
| Sequence_name | DY3.1 | ||||||||
| Molecular_name | DY3.1 | ||||||||
| DY3.1.1 | |||||||||
| CE15745 | |||||||||
| Other_name | tim-13 | ||||||||
| tim13 | Accession_evidence | EMBL | AF144704 | ||||||
| CELE_DY3.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | tin-13 | ||||||||
| DB_info | Database | AceView | gene | 1J336 | |||||
| WormQTL | gene | WBGene00006574 | |||||||
| WormFlux | gene | WBGene00006574 | |||||||
| NDB | locus_tag | CELE_DY3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006574|UniProtKB=O45319 | |||||||
| family | PTHR19338 | ||||||||
| NCBI | gene | 172686 | |||||||
| RefSeq | protein | NM_059969.7 | |||||||
| SwissProt | UniProtAcc | O45319 | |||||||
| TREEFAM | TREEFAM_ID | TF106194 | |||||||
| UniProt_GCRP | UniProtAcc | O45319 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tin | ||||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034214 | ||||||||
| 00034215 | |||||||||
| 00034216 | |||||||||
| 00034217 | |||||||||
| 00034218 | |||||||||
| 00034219 | |||||||||
| 00034220 | |||||||||
| 00034221 | |||||||||
| 00034222 | |||||||||
| Contained_in_operon | CEOP1890 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00000941 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial intermembrane space protein transporter complex. Is an ortholog of human TIMM13 (translocase of inner mitochondrial membrane 13). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | DY3.1 | |||||||
| Corresponding_transcript | DY3.1.1 | ||||||||
| Other_sequence (35) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00116879 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003299 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043548 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027894 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027290 | ||||||||
| Expr1147540 | |||||||||
| Expr2017405 | |||||||||
| Expr2035544 | |||||||||
| Drives_construct | WBCnstr00034295 | ||||||||
| Construct_product | WBCnstr00034295 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction | WBInteraction000114208 | ||||||||
| WBInteraction000174912 | |||||||||
| WBInteraction000174913 | |||||||||
| WBInteraction000426404 | |||||||||
| WBInteraction000559165 | |||||||||
| WBInteraction000580449 | |||||||||
| Map_info | Map | I | Position | 3.06141 | |||||
| Positive | Positive_clone | DY3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024532 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | tim-13 created on basis of AF144704, [020802 ck1] | ||||||||
| tim-13 is now tin-13 based on JAH [020924 ck1] | |||||||||
| tim-13 is renamed to tin-13 based on its product classified as Transport to INner mitochondrial membrane (yeast TIM) - gene class tin [JAH] [020923 ck1] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
