WormBase Tree Display for Gene: WBGene00006487
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| WBGene00006487 | SMap | S_parent | Sequence | C30H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | zipt-17 | Person_evidence | WBPerson341 | |||||
| Sequence_name | C30H6.2 | ||||||||
| Molecular_name | C30H6.2 | ||||||||
| C30H6.2.1 | |||||||||
| CE47514 | |||||||||
| C30H6.2.2 | |||||||||
| Other_name | tag-141 | Person_evidence | WBPerson201 | ||||||
| zipt-22 | Person_evidence | WBPerson341 | |||||||
| CELE_C30H6.2 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | zipt-17 | ||||||||
| DB_info | Database | AceView | gene | 4S306 | |||||
| WormQTL | gene | WBGene00006487 | |||||||
| WormFlux | gene | WBGene00006487 | |||||||
| NDB | locus_tag | CELE_C30H6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006487|UniProtKB=Q9XVR4 | |||||||
| family | PTHR16950 | ||||||||
| NCBI | gene | 183065 | |||||||
| RefSeq | protein | NM_070695.3 | |||||||
| TrEMBL | UniProtAcc | Q9XVR4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVR4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 29 Nov 2016 11:06:21 | WBPerson2970 | Name_change | CGC_name | tag-141 | ||||
| 3 | 08 Jun 2017 16:03:19 | WBPerson2970 | Name_change | CGC_name | zipt-17 | ||||
| Other_name | zipt-22 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | zipt | ||||||||
| Allele (126) | |||||||||
| Strain | WBStrain00001365 | ||||||||
| WBStrain00002362 | |||||||||
| WBStrain00031604 | |||||||||
| WBStrain00035799 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102701 | ||||||||
| 00102702 | |||||||||
| 00102703 | |||||||||
| 00102704 | |||||||||
| 00102705 | |||||||||
| 00114143 | |||||||||
| 00114144 | |||||||||
| 00114145 | |||||||||
| 00114146 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00006486 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00021936 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00006494 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044067 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007591 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable zinc ion transmembrane transporter activity. Predicted to be involved in intracellular zinc ion homeostasis and zinc ion transmembrane transport. Predicted to be located in membrane. Expressed in pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C30H6.2 | |||||||
| Corresponding_CDS_history | C30H6.2:wp231 | ||||||||
| Corresponding_transcript | C30H6.2.1 | ||||||||
| C30H6.2.2 | |||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf652421 | ||||||||
| WBsf999032 | |||||||||
| WBsf999033 | |||||||||
| WBsf1018983 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011405 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029367 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062725 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041575 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062726 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1872 | ||||||||
| Expr3288 | |||||||||
| Expr4317 | |||||||||
| Expr5392 | |||||||||
| Expr5393 | |||||||||
| Expr1017916 | |||||||||
| Expr1145599 | |||||||||
| Expr2018173 | |||||||||
| Expr2036310 | |||||||||
| Drives_construct | WBCnstr00002255 | ||||||||
| WBCnstr00004272 | |||||||||
| WBCnstr00011285 | |||||||||
| WBCnstr00011916 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | IV | Position | 16.5392 | Error | 0.009886 | |||
| Positive | Positive_clone | C30H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4677 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028592 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058994 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
