WormBase Tree Display for Gene: WBGene00006459
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| WBGene00006459 | SMap | S_parent | Sequence | H02I12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tag-89 | Person_evidence | WBPerson201 | |||||
| Sequence_name | H02I12.3 | ||||||||
| Molecular_name | H02I12.3 | ||||||||
| H02I12.3.1 | |||||||||
| CE16160 | |||||||||
| Other_name | CELE_H02I12.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | tag-89 | ||||||||
| DB_info | Database | AceView | gene | 4M161 | |||||
| WormQTL | gene | WBGene00006459 | |||||||
| WormFlux | gene | WBGene00006459 | |||||||
| NDB | locus_tag | CELE_H02I12.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006459|UniProtKB=O45601 | |||||||
| family | PTHR24247 | ||||||||
| NCBI | gene | 178062 | |||||||
| RefSeq | protein | NM_069746.3 | |||||||
| TREEFAM | TREEFAM_ID | TF318526 | |||||||
| TrEMBL | UniProtAcc | O45601 | |||||||
| UniProt_GCRP | UniProtAcc | O45601 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tag | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00035635 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00015299 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00017338 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled serotonin receptor activity and neurotransmitter receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger and chemical synaptic transmission. Predicted to be located in dendrite. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H02I12.3 | |||||||
| Corresponding_transcript | H02I12.3.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf660705 | ||||||||
| WBsf997829 | |||||||||
| WBsf997830 | |||||||||
| WBsf1018202 | |||||||||
| WBsf1018203 | |||||||||
| WBsf229154 | |||||||||
| WBsf229155 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016165 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033644 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049263 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011614 | ||||||||
| Expr1153006 | |||||||||
| Expr2017292 | |||||||||
| Expr2035427 | |||||||||
| Drives_construct | WBCnstr00034350 | ||||||||
| Construct_product | WBCnstr00034350 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | IV | Position | 4.97187 | Error | 0.001085 | |||
| Positive | Positive_clone | H02I12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032196 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
