WormBase Tree Display for Gene: WBGene00006452
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| WBGene00006452 | SMap | S_parent | Sequence | R148 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | heh-1 | Person_evidence | WBPerson655 | |||||
| Sequence_name | R148.6 | ||||||||
| Molecular_name | R148.6 | ||||||||
| R148.6.1 | |||||||||
| CE31057 | |||||||||
| Other_name | tag-79 | CGC_data_submission | |||||||
| CELE_R148.6 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | heh-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | heh | ||||||||
| Allele (19) | |||||||||
| Strain | WBStrain00003220 | ||||||||
| WBStrain00022846 | |||||||||
| WBStrain00035732 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029566 | ||||||||
| 00029567 | |||||||||
| 00029568 | |||||||||
| 00029569 | |||||||||
| 00114094 | |||||||||
| 00114095 | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Concise_description | tag-79/R148.6 is orthologous to human NPC2 (OMIM:601015, mutated in Niemann-Pick disease type C2) | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 09 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable sterol binding activity. Predicted to be involved in sterol transport. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in Niemann-Pick disease type C2. Is an ortholog of human NPC2 (NPC intracellular cholesterol transporter 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:14504 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14537) | ||||
| DOID:0070114 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14537) | ||||||
| Molecular_info | Corresponding_CDS | R148.6 | |||||||
| Corresponding_transcript | R148.6.1 | ||||||||
| Associated_feature | WBsf1014525 | ||||||||
| WBsf226325 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033286 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051970 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017868 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006770 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092949 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6544 | ||||||||
| Expr1013014 | |||||||||
| Expr1032628 | |||||||||
| Expr1155614 | |||||||||
| Expr2012394 | |||||||||
| Expr2030630 | |||||||||
| Drives_construct | WBCnstr00003695 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (175) | |||||||||
| Interaction | WBInteraction000307264 | ||||||||
| WBInteraction000347801 | |||||||||
| WBInteraction000427415 | |||||||||
| WBInteraction000548599 | |||||||||
| WBInteraction000550293 | |||||||||
| Map_info | Map | III | Position | -7.40298 | Error | 0.018291 | |||
| Positive | Positive_clone | R148 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4491 | |||||||
| 5488 | |||||||||
| 5622 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024084 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00053559 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
