WormBase Tree Display for Gene: WBGene00006440

WBGene00006440 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: Y47G6A
  Identity: Version: 2
    Name: CGC_name: nefr-1
      Sequence_name: Y47G6A.28
      Molecular_name: Y47G6A.28
        Y47G6A.28.1
        CE43948
      Other_name: tag-63
        CELE_Y47G6A.28 Accession_evidence: NDB BX284601
      Public_name: nefr-1
    DB_info: Database: AceView gene 1E17
        WormQTL gene WBGene00006440
        WormFlux gene WBGene00006440
        NDB locus_tag CELE_Y47G6A.28
        NCBI gene 171913
        RefSeq protein NM_058760.5
        TrEMBL UniProtAcc Q95XZ1
        UniProt_GCRP UniProtAcc Q95XZ1
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:40 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 19 Apr 2021 01:27:01 WBPerson1983 Name_change: CGC_name: nefr-1
                Other_name: tag-63
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nefr
    Allele (203)
    Strain: WBStrain00007587
      WBStrain00035637
    RNASeq_FPKM (74)
    GO_annotation: 00089452
      00089453
    Contained_in_operon: CEOP1096
    Ortholog (23)
    Structured_description: Automated_description: Predicted to enable kinase activity. Predicted to be involved in phosphorylation. Expressed in lateral ganglion; nerve ring; and neurons. Used to study Charcot-Marie-Tooth disease. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Experimental_model: DOID:10595 Homo sapiens Paper_evidence: WBPaper00058719
          Curator_confirmed: WBPerson324
          Date_last_updated: 25 May 2021 00:00:00
  Models_disease_asserted: WBDOannot00000917
  Molecular_info: Corresponding_CDS: Y47G6A.28
    Corresponding_CDS_history: Y47G6A.28:wp205
    Corresponding_transcript: Y47G6A.28.1
    Other_sequence: CR04643
      CRC11927_1
      Tcir_isotig23177
    Associated_feature: WBsf656116
      WBsf983146
      WBsf1009505
  Experimental_info: RNAi_result: WBRNAi00004646 Inferred_automatically: RNAi_primary
      WBRNAi00056818 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15501
      Expr1018859
      Expr1032619
      Expr1160272
      Expr2017287
      Expr2035422
    Drives_construct: WBCnstr00042189
    Microarray_results (23)
    Expression_cluster (104)
    Interaction: WBInteraction000565227
      WBInteraction000565229
      WBInteraction000565230
  Map_info: Map: I Position: -3.54846 Error: 0.076741
    Positive: Positive_clone: Y47G6A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00052091
    WBPaper00058719
    WBPaper00062588
    WBPaper00063956
  Remark: Gene name created from parsing 'genotype' field from CGC strain information CGC_data_submission
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene