WormBase Tree Display for Gene: WBGene00006430
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| WBGene00006430 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K02F3 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | tag-51 | Person_evidence | WBPerson201 | |||||
| Sequence_name | K02F3.1 | ||||||||
| Molecular_name | K02F3.1 | ||||||||
| K02F3.1.1 | |||||||||
| CE31028 | |||||||||
| Other_name | CELE_K02F3.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | tag-51 | ||||||||
| DB_info | Database | AceView | gene | 3B473 | |||||
| WormQTL | gene | WBGene00006430 | |||||||
| WormFlux | gene | WBGene00006430 | |||||||
| NDB | locus_tag | CELE_K02F3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006430|UniProtKB=P46064 | |||||||
| family | PTHR32122 | ||||||||
| NCBI | gene | 175245 | |||||||
| RefSeq | protein | NM_064876.10 | |||||||
| SwissProt | UniProtAcc | P46064 | |||||||
| TREEFAM | TREEFAM_ID | TF353820 | |||||||
| UniProt_GCRP | UniProtAcc | P46064 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 02 Nov 2007 12:01:11 | WBPerson2970 | Event | Acquires_merge | WBGene00019325 | ||||
| Name_change | Sequence_name | K02F3.1 | |||||||
| Acquires_merge | WBGene00019325 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tag | ||||||||
| Allele | WBVar00799856 | ||||||||
| WBVar00799857 | |||||||||
| WBVar00799858 | |||||||||
| WBVar00799859 | |||||||||
| WBVar00799860 | |||||||||
| WBVar00799861 | |||||||||
| WBVar00799862 | |||||||||
| WBVar00799863 | |||||||||
| WBVar00799864 | |||||||||
| WBVar00799865 | |||||||||
| WBVar00799866 | |||||||||
| WBVar00799867 | |||||||||
| WBVar01500082 | |||||||||
| WBVar00799868 | |||||||||
| WBVar02078095 | |||||||||
| WBVar01499552 | |||||||||
| WBVar00388777 | |||||||||
| WBVar00388778 | |||||||||
| WBVar02069538 | |||||||||
| WBVar01498832 | |||||||||
| WBVar01836812 | |||||||||
| WBVar01903532 | |||||||||
| WBVar01903533 | |||||||||
| WBVar01903534 | |||||||||
| WBVar02096759 | |||||||||
| WBVar00007176 | |||||||||
| WBVar00007181 | |||||||||
| WBVar00007186 | |||||||||
| WBVar02030177 | |||||||||
| WBVar02030178 | |||||||||
| WBVar00235333 | |||||||||
| WBVar01769262 | |||||||||
| WBVar02012653 | |||||||||
| WBVar01769263 | |||||||||
| WBVar01769264 | |||||||||
| WBVar01769265 | |||||||||
| WBVar01769266 | |||||||||
| WBVar01769267 | |||||||||
| WBVar01769268 | |||||||||
| WBVar01769269 | |||||||||
| WBVar01769270 | |||||||||
| WBVar01769271 | |||||||||
| WBVar01769272 | |||||||||
| WBVar02131414 | |||||||||
| WBVar01769273 | |||||||||
| WBVar01769274 | |||||||||
| WBVar01322546 | |||||||||
| WBVar01322547 | |||||||||
| WBVar01322548 | |||||||||
| WBVar01500205 | |||||||||
| WBVar01443309 | |||||||||
| WBVar01443310 | |||||||||
| WBVar01443311 | |||||||||
| WBVar01443312 | |||||||||
| WBVar01443313 | |||||||||
| WBVar01443314 | |||||||||
| WBVar01443315 | |||||||||
| WBVar00251507 | |||||||||
| WBVar01564446 | |||||||||
| WBVar00091762 | |||||||||
| WBVar01564447 | |||||||||
| WBVar01564448 | |||||||||
| WBVar00251523 | |||||||||
| WBVar01917802 | |||||||||
| WBVar01499509 | |||||||||
| WBVar02151417 | |||||||||
| Strain | WBStrain00035652 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3044 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Enriched in body wall musculature; germ line; and neurons based on RNA-seq and microarray studies. Is affected by several genes including skn-1; glp-1; and hsf-1 based on RNA-seq and microarray studies. Is affected by five chemicals including stavudine; paraquat; and Colistin based on RNA-seq and microarray studies. Is an ortholog of human TAF1A (TATA-box binding protein associated factor, RNA polymerase I subunit A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K02F3.1 | |||||||
| Corresponding_transcript | K02F3.1.1 | ||||||||
| Other_sequence | CBC03398_1 | ||||||||
| CR11073 | |||||||||
| CRC04109_1 | |||||||||
| CR11074 | |||||||||
| Associated_feature | WBsf644928 | ||||||||
| WBsf224407 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00049742 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033887 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049743 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011458 | ||||||||
| Expr1032610 | |||||||||
| Expr1153461 | |||||||||
| Expr2017284 | |||||||||
| Expr2035419 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction (63) | |||||||||
| Map_info | Map | III | Position | -25.6959 | Error | 0.023471 | |||
| Positive | Positive_clone | K02F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010459 | ||||||||
| WBPaper00010644 | |||||||||
| Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
