WormBase Tree Display for Gene: WBGene00006419
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| WBGene00006419 | SMap | S_parent | Sequence | R02C2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | oac-39 | Person_evidence | WBPerson567 | |||||
| Sequence_name | R02C2.3 | ||||||||
| Molecular_name | R02C2.3a | ||||||||
| R02C2.3a.1 | |||||||||
| CE50684 | |||||||||
| R02C2.3b | |||||||||
| CE50875 | |||||||||
| R02C2.3c | |||||||||
| CE50844 | |||||||||
| R02C2.3b.1 | |||||||||
| R02C2.3c.1 | |||||||||
| Other_name | tag-40 | Person_evidence | WBPerson201 | ||||||
| CELE_R02C2.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | oac-39 | ||||||||
| DB_info | Database | AceView | gene | 5A726 | |||||
| WormQTL | gene | WBGene00006419 | |||||||
| WormFlux | gene | WBGene00006419 | |||||||
| NDB | locus_tag | CELE_R02C2.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006419|UniProtKB=A0A0K3ASR6 | |||||||
| family | PTHR11161 | ||||||||
| NCBI | gene | 178553 | |||||||
| RefSeq | protein | NM_001313232.3 | |||||||
| NM_001313233.3 | |||||||||
| NM_001313231.4 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3ASR6 | |||||||
| A0A0K3AS93 | |||||||||
| A0A0K3AV17 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3ASR6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 18 Jul 2008 14:49:34 | WBPerson2970 | Name_change | CGC_name | oac-39 | ||||
| Other_name | tag-40 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | oac | ||||||||
| Allele (99) | |||||||||
| Possibly_affected_by | WBVar02154056 | ||||||||
| Strain | WBStrain00035614 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000941 | ||||||||
| 00114050 | |||||||||
| Ortholog (59) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R02C2.3a | |||||||
| R02C2.3b | |||||||||
| R02C2.3c | |||||||||
| Corresponding_CDS_history | R02C2.3:wp107 | ||||||||
| R02C2.3:wp174 | |||||||||
| R02C2.3:wp248 | |||||||||
| Corresponding_transcript | R02C2.3a.1 | ||||||||
| R02C2.3b.1 | |||||||||
| R02C2.3c.1 | |||||||||
| Other_sequence | FC809639.1 | ||||||||
| GT570893.1 | |||||||||
| JI166532.1 | |||||||||
| CJC01928_1 | |||||||||
| Associated_feature | WBsf999105 | ||||||||
| WBsf999106 | |||||||||
| WBsf999107 | |||||||||
| WBsf999108 | |||||||||
| WBsf999109 | |||||||||
| WBsf999110 | |||||||||
| WBsf1019035 | |||||||||
| WBsf1019036 | |||||||||
| WBsf233251 | |||||||||
| WBsf233252 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051118 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017309 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034523 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025072 | ||||||||
| Expr1032607 | |||||||||
| Expr1154825 | |||||||||
| Expr2014562 | |||||||||
| Expr2032796 | |||||||||
| Drives_construct | WBCnstr00037911 | ||||||||
| Construct_product | WBCnstr00037911 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (56) | |||||||||
| Interaction (132) | |||||||||
| Map_info | Map | V | Position | -20.0056 | Error | 0.000708 | |||
| Positive | Positive_clone | R02C2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4135 | |||||||
| 5487 | |||||||||
| 5578 | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
