WormBase Tree Display for Gene: WBGene00006383
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| WBGene00006383 | SMap | S_parent | Sequence | Y37E11B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | taf-2 | |||||||
| Sequence_name | Y37E11B.4 | ||||||||
| Molecular_name | Y37E11B.4 | ||||||||
| Y37E11B.4.1 | |||||||||
| CE52319 | |||||||||
| Other_name | CELE_Y37E11B.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | taf-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | taf | ||||||||
| Allele (214) | |||||||||
| Strain | WBStrain00051442 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP4100 | ||||||||
| Ortholog (41) | |||||||||
| Structured_description | Concise_description | taf-2 encodes a member of the peptidase M1 family, a predicted aminopeptidase with similarity to human TBP-associated factor 2. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable chromatin binding activity and transcription cis-regulatory region binding activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Involved in embryo development and transcription initiation at RNA polymerase II promoter. Predicted to be located in nucleus. Predicted to be part of transcription factor TFIID complex. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 40. Is an ortholog of human TAF2 (TATA-box binding protein associated factor 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081205 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11536) | ||||
| Molecular_info | Corresponding_CDS | Y37E11B.4 | |||||||
| Corresponding_CDS_history | Y37E11B.4:wp261 | ||||||||
| Corresponding_transcript | Y37E11B.4.1 | ||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf667840 | ||||||||
| WBsf229896 | |||||||||
| WBsf229897 | |||||||||
| WBsf229898 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055919 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036806 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027812 | ||||||||
| Expr1032580 | |||||||||
| Expr1159440 | |||||||||
| Expr2017212 | |||||||||
| Expr2035348 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction (59) | |||||||||
| Map_info | Map | IV | Position | -3.13199 | Error | 0.003545 | |||
| Positive | Positive_clone | Y37E11B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004890 | ||||||||
| WBPaper00006475 | |||||||||
| WBPaper00029038 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Sequence connection from [source: A Walker] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
