WormBase Tree Display for Gene: WBGene00006307
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| WBGene00006307 | SMap | S_parent | Sequence | F28C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | suf-1 | |||||||
| Sequence_name | F28C6.6 | ||||||||
| Molecular_name | F28C6.6 | ||||||||
| F28C6.6.1 | |||||||||
| CE03277 | |||||||||
| Other_name | CELE_F28C6.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | suf-1 | ||||||||
| DB_info | Database | AceView | gene | 2I895 | |||||
| WormQTL | gene | WBGene00006307 | |||||||
| WormFlux | gene | WBGene00006307 | |||||||
| NDB | locus_tag | CELE_F28C6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006307|UniProtKB=Q19866 | |||||||
| family | PTHR19980 | ||||||||
| NCBI | gene | 174380 | |||||||
| RefSeq | protein | NM_063424.8 | |||||||
| TREEFAM | TREEFAM_ID | TF105867 | |||||||
| TrEMBL | UniProtAcc | Q19866 | |||||||
| UniProt_GCRP | UniProtAcc | Q19866 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | suf | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00032330 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066158 | ||||||||
| 00066159 | |||||||||
| 00066160 | |||||||||
| 00066161 | |||||||||
| 00113951 | |||||||||
| 00113952 | |||||||||
| 00113953 | |||||||||
| Contained_in_operon | CEOP2372 | ||||||||
| Ortholog (45) | |||||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in RNA 3'-end processing. Predicted to be located in nucleus. Is an ortholog of human CSTF3 (cleavage stimulation factor subunit 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28C6.6 | |||||||
| Corresponding_transcript | F28C6.6.1 | ||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf644488 | ||||||||
| WBsf221788 | |||||||||
| WBsf221789 | |||||||||
| WBsf221790 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00008180 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027667 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106910 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045819 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000580 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr717 | ||||||||
| Expr1016051 | |||||||||
| Expr1032548 | |||||||||
| Expr1149727 | |||||||||
| Expr2017108 | |||||||||
| Expr2035244 | |||||||||
| Drives_construct | WBCnstr00034403 | ||||||||
| Construct_product | WBCnstr00034403 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (116) | |||||||||
| Map_info | Map | II | Position | 0.826353 | Error | 0.000412 | |||
| Positive | Positive_clone | F28C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5670 | |||||||
| 5252 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002427 | ||||||||
| WBPaper00006292 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048493 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
