WormBase Tree Display for Gene: WBGene00006220

WBGene00006220 SMap: S_parent: Sequence: T01B11
  Identity: Version: 2
    Name: CGC_name: str-176 Person_evidence: WBPerson42
      Sequence_name: T01B11.5
      Molecular_name: T01B11.5a
        T01B11.5a.1
        CE12900
        T01B11.5b
        CE49659
        T01B11.5b.1
      Other_name: CELE_T01B11.5 Accession_evidence: NDB BX284604
      Public_name: str-176
    DB_info: Database: AceView gene 4J226
        NDB locus_tag CELE_T01B11.5
        Panther gene CAEEL|WormBase=WBGene00006220|UniProtKB=G4S3P8
          family PTHR24064
        NCBI gene 13197055
        RefSeq protein NM_001307281.2
            NM_001380365.1
        TrEMBL UniProtAcc G4S3P8
            X5M5X9
        UniProt_GCRP UniProtAcc G4S3P8
        OMIM gene 604190
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:40 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 11 Feb 2013 10:57:08 WBPerson615 Event: Changed_class: Pseudogene CDS
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: str
    Allele (41)
    RNASeq_FPKM (74)
    GO_annotation: 00009195
      00009196
      00113948
      00113949
      00113950
    Ortholog (87)
    Paralog (27)
    Structured_description: Automated_description: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in acute kidney failure and rheumatoid arthritis. Is an ortholog of several human genes including SLC22A14 (solute carrier family 22 member 14); SLC22A2 (solute carrier family 22 member 2); and SLC22A4 (solute carrier family 22 member 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:7148 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10968)
      DOID:3021 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10966)
  Molecular_info: Corresponding_CDS: T01B11.5a
      T01B11.5b
    Corresponding_transcript: T01B11.5a.1
      T01B11.5b.1
    Corresponding_pseudogene_history: T01B11.5:wp236
    Other_sequence: CRC11233_1
      CSC02145_1
      EY458354.1
      JI171624.1
      CRC12205_1
      CBC13572_1
      ES409701.1
      HBC05415_1
      FD514971.1
  Experimental_info: RNAi_result: WBRNAi00080700 Inferred_automatically: RNAi_primary
      WBRNAi00017931 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2035160
    Microarray_results: SMD_T01B11.5
      A_12_P133760
      A_12_P161358
      A_12_P161359
      A_12_P161360
      Aff_T01B11.5
      GPL19516_CGZ0032507
      GPL21109_T01B11.5
    Expression_cluster (113)
    Interaction: WBInteraction000580424
  Map_info: Map: IV Position: 3.82635 Error: 0.002641
    Positive: Positive_clone: T01B11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene