WormBase Tree Display for Gene: WBGene00006109

WBGene00006109 SMap: S_parent: Sequence: C42D4
  Identity: Version: 1
    Name: CGC_name: str-44 Person_evidence: WBPerson42
      Sequence_name: C42D4.4
      Molecular_name: C42D4.4
        C42D4.4.1
        CE24841
      Other_name: CELE_C42D4.4 Accession_evidence: NDB BX284604
      Public_name: str-44
    DB_info: Database: AceView gene 4H939
        WormQTL gene WBGene00006109
        WormFlux gene WBGene00006109
        NDB locus_tag CELE_C42D4.4
        Panther gene CAEEL|WormBase=WBGene00006109|UniProtKB=Q18571
          family PTHR46178
        NCBI gene 191978
        RefSeq protein NM_068730.1
        TrEMBL UniProtAcc Q18571
        UniProt_GCRP UniProtAcc Q18571
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: str
    Allele: WBVar00919923
      WBVar01499395
      WBVar01499396
      WBVar00428219
      WBVar01499633
      WBVar01500245
      WBVar01910835
    RNASeq_FPKM (74)
    GO_annotation: 00061692
      00061693
    Ortholog: WBGene00056685 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028180 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00040200 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00161992 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00193388 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00190050 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00082068 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00075773 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00116958 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00087620 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g15462 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP40.g10723 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g10724 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g18734 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_IV.g13734 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g17455 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21119 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00284.g8671 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00389.g10581 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_02718 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013876 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_020008 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50031600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g10779 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (267)
    Structured_description: Automated_description: Located in non-motile cilium. Expressed in AWAL; AWAR; AWBL; AWBR; and in male. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C42D4.4
    Corresponding_transcript: C42D4.4.1
    Other_sequence: FG350277.1
  Experimental_info: RNAi_result: WBRNAi00042356 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11116
      Expr11693
      Expr14663
      Expr1027057
      Expr1146343
      Expr2017065
      Expr2035203
    Drives_construct: WBCnstr00034532
      WBCnstr00041215
    Construct_product: WBCnstr00019274
      WBCnstr00034532
    Microarray_results (17)
    Expression_cluster (51)
    Interaction (23)
  Map_info: Map: IV Position: 3.2919 Error: 0.000103
    Positive: Positive_clone: C42D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004572
    WBPaper00025051
    WBPaper00044991
    WBPaper00063548
    WBPaper00064399
    WBPaper00064871
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene