WormBase Tree Display for Gene: WBGene00006101
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| WBGene00006101 | SMap | S_parent | Sequence | T08H10 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | str-35 | Person_evidence | WBPerson42 | ||||||
| Sequence_name | T08H10.2 | |||||||||
| Molecular_name | T08H10.2 | |||||||||
| T08H10.2.1 | ||||||||||
| CE13453 | ||||||||||
| Other_name | CELE_T08H10.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | str-35 | |||||||||
| DB_info | Database | AceView | gene | 5E953 | ||||||
| NDB | locus_tag | CELE_T08H10.2 | ||||||||
| NCBI | gene | 13212612 | ||||||||
| RefSeq | protein | NM_001351864.1 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 28 Apr 2017 00:42:14 | WBPerson1983 | Event | Changed_class | Pseudogene | CDS | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Gene_class | str | |||||||||
| Allele (23) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (22) | ||||||||||
| Paralog (256) | ||||||||||
| Structured_description | Automated_description | Is affected by clk-1 and sir-2.1 based on microarray studies. Is predicted to encode a protein with the following domains: Serpentine type 7TM GPCR chemoreceptor Str and 7TM GPCR, serpentine receptor class r (Str). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | T08H10.2 | ||||||||
| Corresponding_transcript | T08H10.2.1 | |||||||||
| Corresponding_pseudogene_history | T08H10.2:wp259 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018474 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00018477 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr2035198 | |||||||||
| Microarray_results | SMD_T08H10.2 | |||||||||
| A_12_P141100 | ||||||||||
| A_12_P141101 | ||||||||||
| Aff_T08H10.2 | ||||||||||
| GPL19516_CGZ0034291 | ||||||||||
| GPL19516_CGZ0034294 | ||||||||||
| GPL21109_T08H10.2 | ||||||||||
| GPL21109_T08H10.5 | ||||||||||
| Expression_cluster | WBPaper00045774:clk-1_downregulated | |||||||||
| cgc4489_group_9 | ||||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | ||||||||||
| WBPaper00032062:age_regulated_genes | ||||||||||
| WBPaper00044091:Bpseudomallei_repressed_4h | ||||||||||
| WBPaper00044091:Bpseudomallei_repressed_8h | ||||||||||
| WBPaper00044091:Bpseudomallei_repressed_12h | ||||||||||
| [cgc6390]:herm_soma-enriched | ||||||||||
| Map_info | Map | V | Position | -5.25236 | Error | 0.029499 | ||||
| Positive | Positive_clone | T08H10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00027252 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
