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WormBase Tree Display for Gene: WBGene00006015

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Name Class

WBGene00006015SMapS_parentSequenceK09H11
IdentityVersion1
NameCGC_namesrx-124Person_evidenceWBPerson522
Sequence_nameK09H11.8
Molecular_nameK09H11.8
Other_nameCELE_K09H11.8Accession_evidenceNDBBX284605
Public_namesrx-124
DB_infoDatabaseAceViewgene5G207
NDBlocus_tagCELE_K09H11.8
NCBIgene13212988
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:39WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0000336
Gene_classsrx
Allele (40)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in AUA based on single-cell RNA-seq studies. Is affected by lpd-3 and sir-2.1 based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_pseudogeneK09H11.8
Corresponding_pseudogene_historyK09H11.8:wp140
K09H11.8:wp261
Experimental_infoMicroarray_resultsSMD_K09H11.5
SMD_K09H11.5:2
185050_at
A_12_P139980
Expression_clusterWBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00061651:AUA_enriched
WBPaper00064661:lpd-3(ok2138)_downregulated
WBPaper00065841:30_5
WBPaper00065841:67_0
WBPaper00065841:90_0
WBPaper00065841:142_0
cgc4489_group_6
WBPaper00026929:sir-2.1_overexpression_regulated
Map_infoMapVPosition-1.08256Error0.026009
PositivePositive_cloneK09H11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene