WormBase Tree Display for Gene: WBGene00005996

WBGene00005996 SMap: S_parent: Sequence: F40H7
  Identity: Version: 1
    Name: CGC_name: srx-105 Person_evidence: WBPerson522
      Sequence_name: F40H7.8
      Molecular_name: F40H7.8
        F40H7.8.1
        CE36438
      Other_name: CELE_F40H7.8 Accession_evidence: NDB BX284602
      Public_name: srx-105
    DB_info: Database: AceView gene 2D988
        WormQTL gene WBGene00005996
        WormFlux gene WBGene00005996
        NDB locus_tag CELE_F40H7.8
        Panther gene CAEEL|WormBase=WBGene00005996|UniProtKB=O17093
          family PTHR46952
        NCBI gene 185584
        RefSeq protein NM_062218.2
        TREEFAM TREEFAM_ID TF315574
        TrEMBL UniProtAcc O17093
        UniProt_GCRP UniProtAcc O17093
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srx
    Allele (47)
    RNASeq_FPKM (74)
    GO_annotation: 00029324
    Ortholog: WBGene00040208 Caenorhabditis briggsae From_analysis: OMA
      CBOVI.g7054 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g7055 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP29.g14686 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g8747 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3559 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      chrII_pilon.g4073 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00277612 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279384 Pristionchus pacificus From_analysis: WormBase-Compara
    Paralog (96)
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in chemosensory neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F40H7.8
    Corresponding_CDS_history: F40H7.8:wp107
      F40H7.8:wp119
    Corresponding_transcript: F40H7.8.1
    Associated_feature: WBsf987341
      WBsf987342
      WBsf987343
      WBsf1011951
      WBsf222876
  Experimental_info: RNAi_result: WBRNAi00032065 Inferred_automatically: RNAi_primary
      WBRNAi00046935 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6022
      Expr14185
      Expr15425
      Expr1020870
      Expr1150803
    Drives_construct: WBCnstr00004082
      WBCnstr00034606
    Construct_product: WBCnstr00034606
    Microarray_results (14)
    Expression_cluster (26)
    Interaction (61)
  Map_info: Map: II Position: -6.22039 Error: 0.00021
    Positive: Positive_clone: F40H7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene