WormBase Tree Display for Gene: WBGene00005895
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| WBGene00005895 | SMap | S_parent | Sequence | Y49C4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srx-4 | Person_evidence | WBPerson522 | |||||
| Sequence_name | Y49C4A.5 | ||||||||
| Molecular_name | Y49C4A.5 | ||||||||
| Y49C4A.5.1 | |||||||||
| CE26128 | |||||||||
| Other_name | Y49C4A.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y49C4A.5 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srx-4 | ||||||||
| DB_info | Database | AceView | gene | 5B168 | |||||
| WormQTL | gene | WBGene00005895 | |||||||
| WormFlux | gene | WBGene00005895 | |||||||
| NDB | locus_tag | CELE_Y49C4A.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005895|UniProtKB=Q965U4 | |||||||
| family | PTHR22718 | ||||||||
| NCBI | gene | 190064 | |||||||
| RefSeq | protein | NM_070895.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315320 | |||||||
| TrEMBL | UniProtAcc | Q965U4 | |||||||
| UniProt_GCRP | UniProtAcc | Q965U4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srx | ||||||||
| Allele (169) | |||||||||
| Strain | WBStrain00037627 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00090686 | ||||||||
| Ortholog (35) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in amphid neurons; rectal epithelial cell; and vulval cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y49C4A.5 | |||||||
| Corresponding_transcript | Y49C4A.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020770 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056998 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14177 | ||||||||
| Expr1010874 | |||||||||
| Expr1160445 | |||||||||
| Drives_construct | WBCnstr00034666 | ||||||||
| Construct_product | WBCnstr00034666 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (13) | |||||||||
| Map_info | Map | V | Position | -19.9645 | |||||
| Positive | Positive_clone | Y49C4A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
