WormBase Tree Display for Gene: WBGene00005892
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| WBGene00005892 | SMap | S_parent | Sequence | R03H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srx-1 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F59E11.1 | ||||||||
| Molecular_name | F59E11.1 | ||||||||
| F59E11.1.1 | |||||||||
| CE35886 | |||||||||
| Other_name | CELE_F59E11.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srx-1 | ||||||||
| DB_info | Database | AceView | gene | 5J483 | |||||
| WormQTL | gene | WBGene00005892 | |||||||
| NDB | locus_tag | CELE_F59E11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005892|UniProtKB=O45695 | |||||||
| family | PTHR22718 | ||||||||
| NCBI | gene | 24104676 | |||||||
| RefSeq | protein | NM_001307793.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315320 | |||||||
| TrEMBL | UniProtAcc | O45695 | |||||||
| UniProt_GCRP | UniProtAcc | O45695 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srx | ||||||||
| Allele (35) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00035010 | ||||||||
| Ortholog (48) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in head mesodermal cell; neurons; and non-striated muscle. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F59E11.1 | |||||||
| Corresponding_CDS_history | F59E11.1:wp110 | ||||||||
| Corresponding_transcript | F59E11.1.1 | ||||||||
| Other_sequence | FG647788.1 | ||||||||
| FG647812.1 | |||||||||
| Associated_feature | WBsf232191 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00016109 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033200 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049187 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14175 | ||||||||
| Expr1024307 | |||||||||
| Expr1152932 | |||||||||
| Expr2016823 | |||||||||
| Expr2034993 | |||||||||
| Drives_construct | WBCnstr00034669 | ||||||||
| Construct_product | WBCnstr00034669 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (20) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | V | Position | 1.90269 | Error | 0.000455 | |||
| Positive | Positive_clone | F59E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
