WormBase Tree Display for Gene: WBGene00005712
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| WBGene00005712 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R13F6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | srv-1 | Person_evidence | WBPerson522 | |||||
| Sequence_name | R13F6.3 | ||||||||
| Molecular_name | R13F6.3 | ||||||||
| R13F6.3.1 | |||||||||
| CE33437 | |||||||||
| R13F6.3.2 | |||||||||
| Other_name | srg-12 | Person_evidence | WBPerson522 | ||||||
| CELE_R13F6.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | srv-1 | ||||||||
| DB_info | Database | AceView | gene | 3H943 | |||||
| WormQTL | gene | WBGene00005712 | |||||||
| WormFlux | gene | WBGene00005712 | |||||||
| NDB | locus_tag | CELE_R13F6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005712|UniProtKB=P46564 | |||||||
| family | PTHR31627 | ||||||||
| NCBI | gene | 191838 | |||||||
| RefSeq | protein | NM_066088.8 | |||||||
| SwissProt | UniProtAcc | P46564 | |||||||
| TREEFAM | TREEFAM_ID | TF319193 | |||||||
| UniProt_GCRP | UniProtAcc | P46564 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srv | ||||||||
| Allele (45) | |||||||||
| Strain | WBStrain00003116 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046472 | ||||||||
| 00046473 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in CAN; amphid neurons; and excretory duct. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R13F6.3 | |||||||
| Corresponding_CDS_history | R13F6.3:wp93 | ||||||||
| Corresponding_transcript | R13F6.3.1 | ||||||||
| R13F6.3.2 | |||||||||
| Associated_feature | WBsf717080 | ||||||||
| WBsf225159 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034924 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017838 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005563 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051920 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1138 | ||||||||
| Expr6532 | |||||||||
| Expr14160 | |||||||||
| Expr1022334 | |||||||||
| Expr1032528 | |||||||||
| Expr1155572 | |||||||||
| Expr2016730 | |||||||||
| Expr2034910 | |||||||||
| Drives_construct | WBCnstr00003599 | ||||||||
| WBCnstr00034773 | |||||||||
| Construct_product | WBCnstr00034773 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (119) | |||||||||
| Map_info | Map | III | Position | -0.930885 | Error | 0.001915 | |||
| Positive | Positive_clone | R13F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002314 | ||||||||
| WBPaper00005295 | |||||||||
| WBPaper00015440 | |||||||||
| Remark | srg-12 is retired and became srv-1 [Robertson H][021211 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
