WormBase Tree Display for Gene: WBGene00005690
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| WBGene00005690 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C38C3 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sru-27 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C38C3.2 | ||||||||
| Molecular_name | C38C3.2 | ||||||||
| C38C3.2.1 | |||||||||
| CE08638 | |||||||||
| Other_name | CELE_C38C3.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | sru-27 | ||||||||
| DB_info | Database | AceView | gene | 5B977 | |||||
| WormQTL | gene | WBGene00005690 | |||||||
| WormFlux | gene | WBGene00005690 | |||||||
| NDB | locus_tag | CELE_C38C3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005690|UniProtKB=O17077 | |||||||
| family | PTHR46045 | ||||||||
| NCBI | gene | 183300 | |||||||
| RefSeq | protein | NM_071030.4 | |||||||
| TREEFAM | TREEFAM_ID | TF315904 | |||||||
| TrEMBL | UniProtAcc | O17077 | |||||||
| UniProt_GCRP | UniProtAcc | O17077 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sru | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029288 | ||||||||
| Ortholog (44) | |||||||||
| Paralog (120) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Expressed in neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C38C3.2 | |||||||
| Corresponding_transcript | C38C3.2.1 | ||||||||
| Associated_feature | WBsf646670 | ||||||||
| WBsf231418 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029652 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042138 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011741 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7914 | ||||||||
| Expr1146140 | |||||||||
| Expr2016702 | |||||||||
| Expr2034886 | |||||||||
| Drives_construct | WBCnstr00012989 | ||||||||
| WBCnstr00034788 | |||||||||
| Construct_product | WBCnstr00034788 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (55) | |||||||||
| Interaction | WBInteraction000241698 | ||||||||
| WBInteraction000242167 | |||||||||
| WBInteraction000242461 | |||||||||
| WBInteraction000253901 | |||||||||
| WBInteraction000283658 | |||||||||
| WBInteraction000303360 | |||||||||
| WBInteraction000385619 | |||||||||
| WBInteraction000402017 | |||||||||
| WBInteraction000404937 | |||||||||
| WBInteraction000416298 | |||||||||
| Map_info | Map | V | Position | -18.8134 | Error | 0.026984 | |||
| Positive | Positive_clone | C38C3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
